| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0348 |
|---|
| Symbol | |
|---|
| ID | 8324506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 377686 |
|---|
| End bp | 378945 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644940893 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003098163 |
|---|
| Protein GI | 256374503 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2182] Maltose-binding periplasmic proteins/domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGTA CCACCCTCCT GACGGCACTG GCCGCGGGCT TAGCCCCCGC CCTCGCCCTC
ACCGCCTGCG GTGGCTCTTC CGGCGGCGGC GGCGCGAGCG GCGAGGTCGT CTTCTGGGAC
ACCAGCGGTC CCAACGAGAG CCCCGTCTTC ACCAAGGTCG CCCAGGACTG CGCGGCCAAG
GACGGCTACC AGGTCAAGAC CGAGACCGTC GCCTTCGACG CGGCGCTCAA CAACTACAAG
ACCGCCGCGC AGGGCGGGCA GGGCCCGGAC GTGTTCCGCG CCGAGGTCGC CTGGGTGCCG
CAGCTGGCCA AGAACGGCCT CGTCCTCGAC CTGACCGGCA CCGACCTGGT CAAGGACACC
TCGGACTTCC TGGAGACCCC GCTCGGGTCC ACGGTCTACG AGGGCAAGAC CTACGGCGTC
CCCCAGGTCA CCGACTCGCT CGCCCTCTTC TACAACAAGA AGCTGCTGGC CGACGCGGGC
GTGCAGCCCC CGAAGACCTG GGACGAGCTG AAGTCCGTCG CTGCCAAGCT CGGCGGCGAG
AAGGCGTTCT TCGTCAACAA CGACGCCTAC TACGCCCTGC CCTTCCTCTA CGGCGCGGGC
GGCGACCTGG TCGACGCCGA GGCCAAGGAG ATCGTGGTCT CCTCGCCGGA GAACGTGAAG
GGCCTGGAGA CCGCCAAGGG CCTGGTCGAC GCCAAGGCCG CCACCACCGC GCTCGACGCG
GGCAACTCCT ACAGCAACAT GCAGGCCGGC TTCGGCTCCG GCGAGATCGC CATGGTCGTC
AACGGCCCCT GGTCCGTCCC CGACTACCTC AAGGGCGCCG CGTTCGCCGA CGAGTCCAAC
CTCGGCATCG CGCCCGTCCC CGGCGTCACC GAGGCCACCG CCGGGCTCGC CCCGGTCGGC
GGCCACGACT ACGTGGTGCG CCAGGGCGCC AAGGCCAAGG ACAACGCGCT CAAGCTCATC
GCCTGCATGA GCTCCGCCGA GTCCCAGGCG AAGATCGCCA CCGAGCTGGG CCTGCTGCCC
ACCCGCAAGT CCGCCTACGA GGTCGCCGAG GTCAAGGCCA ACGCGGTCGT CGCGGCCTTC
GAGCCGGTCG TCGCCCAGGC CCACCCCCGG CCGTGGATCC CCGAGGGCGG CCAGCTGTTC
GACCCGCTCA AGACCGCCTA CGCCGACTTC CTCGCGGGGA AGAAGGACGC CAAGTCCGCG
CTGGACGAGG TCGCCAAGAC CTACAAGGAC CAGATCCTGC CCGAGTACAC CGTCGGCTGA
|
|---|
| Protein sequence | MRRTTLLTAL AAGLAPALAL TACGGSSGGG GASGEVVFWD TSGPNESPVF TKVAQDCAAK
DGYQVKTETV AFDAALNNYK TAAQGGQGPD VFRAEVAWVP QLAKNGLVLD LTGTDLVKDT
SDFLETPLGS TVYEGKTYGV PQVTDSLALF YNKKLLADAG VQPPKTWDEL KSVAAKLGGE
KAFFVNNDAY YALPFLYGAG GDLVDAEAKE IVVSSPENVK GLETAKGLVD AKAATTALDA
GNSYSNMQAG FGSGEIAMVV NGPWSVPDYL KGAAFADESN LGIAPVPGVT EATAGLAPVG
GHDYVVRQGA KAKDNALKLI ACMSSAESQA KIATELGLLP TRKSAYEVAE VKANAVVAAF
EPVVAQAHPR PWIPEGGQLF DPLKTAYADF LAGKKDAKSA LDEVAKTYKD QILPEYTVG
|
|---|
| |