Gene Amir_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0348 
Symbol 
ID8324506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp377686 
End bp378945 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content70% 
IMG OID644940893 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003098163 
Protein GI256374503 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2182] Maltose-binding periplasmic proteins/domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACGTA CCACCCTCCT GACGGCACTG GCCGCGGGCT TAGCCCCCGC CCTCGCCCTC 
ACCGCCTGCG GTGGCTCTTC CGGCGGCGGC GGCGCGAGCG GCGAGGTCGT CTTCTGGGAC
ACCAGCGGTC CCAACGAGAG CCCCGTCTTC ACCAAGGTCG CCCAGGACTG CGCGGCCAAG
GACGGCTACC AGGTCAAGAC CGAGACCGTC GCCTTCGACG CGGCGCTCAA CAACTACAAG
ACCGCCGCGC AGGGCGGGCA GGGCCCGGAC GTGTTCCGCG CCGAGGTCGC CTGGGTGCCG
CAGCTGGCCA AGAACGGCCT CGTCCTCGAC CTGACCGGCA CCGACCTGGT CAAGGACACC
TCGGACTTCC TGGAGACCCC GCTCGGGTCC ACGGTCTACG AGGGCAAGAC CTACGGCGTC
CCCCAGGTCA CCGACTCGCT CGCCCTCTTC TACAACAAGA AGCTGCTGGC CGACGCGGGC
GTGCAGCCCC CGAAGACCTG GGACGAGCTG AAGTCCGTCG CTGCCAAGCT CGGCGGCGAG
AAGGCGTTCT TCGTCAACAA CGACGCCTAC TACGCCCTGC CCTTCCTCTA CGGCGCGGGC
GGCGACCTGG TCGACGCCGA GGCCAAGGAG ATCGTGGTCT CCTCGCCGGA GAACGTGAAG
GGCCTGGAGA CCGCCAAGGG CCTGGTCGAC GCCAAGGCCG CCACCACCGC GCTCGACGCG
GGCAACTCCT ACAGCAACAT GCAGGCCGGC TTCGGCTCCG GCGAGATCGC CATGGTCGTC
AACGGCCCCT GGTCCGTCCC CGACTACCTC AAGGGCGCCG CGTTCGCCGA CGAGTCCAAC
CTCGGCATCG CGCCCGTCCC CGGCGTCACC GAGGCCACCG CCGGGCTCGC CCCGGTCGGC
GGCCACGACT ACGTGGTGCG CCAGGGCGCC AAGGCCAAGG ACAACGCGCT CAAGCTCATC
GCCTGCATGA GCTCCGCCGA GTCCCAGGCG AAGATCGCCA CCGAGCTGGG CCTGCTGCCC
ACCCGCAAGT CCGCCTACGA GGTCGCCGAG GTCAAGGCCA ACGCGGTCGT CGCGGCCTTC
GAGCCGGTCG TCGCCCAGGC CCACCCCCGG CCGTGGATCC CCGAGGGCGG CCAGCTGTTC
GACCCGCTCA AGACCGCCTA CGCCGACTTC CTCGCGGGGA AGAAGGACGC CAAGTCCGCG
CTGGACGAGG TCGCCAAGAC CTACAAGGAC CAGATCCTGC CCGAGTACAC CGTCGGCTGA
 
Protein sequence
MRRTTLLTAL AAGLAPALAL TACGGSSGGG GASGEVVFWD TSGPNESPVF TKVAQDCAAK 
DGYQVKTETV AFDAALNNYK TAAQGGQGPD VFRAEVAWVP QLAKNGLVLD LTGTDLVKDT
SDFLETPLGS TVYEGKTYGV PQVTDSLALF YNKKLLADAG VQPPKTWDEL KSVAAKLGGE
KAFFVNNDAY YALPFLYGAG GDLVDAEAKE IVVSSPENVK GLETAKGLVD AKAATTALDA
GNSYSNMQAG FGSGEIAMVV NGPWSVPDYL KGAAFADESN LGIAPVPGVT EATAGLAPVG
GHDYVVRQGA KAKDNALKLI ACMSSAESQA KIATELGLLP TRKSAYEVAE VKANAVVAAF
EPVVAQAHPR PWIPEGGQLF DPLKTAYADF LAGKKDAKSA LDEVAKTYKD QILPEYTVG