Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3121 |
Symbol | |
ID | 8884320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3295555 |
End bp | 3296892 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003511885 |
Protein GI | 291300607 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00116931 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTCCTG GGTTTGGGGA GTCCCGGCTC TCCCGTCGCG GACTGCTGCG GGCCTCGGCG CTGGGCCTGG GTGCCCTGGG CGCGGGCTCG CTGACGGCCT GCGCGGGCTC GAACCCCGAT GAGCTGGTGT TCTGGCATTT CGTCGGGCCC AGCAGCCCGC AGGGCAAGTG GCAGACCACG ATGGTCGACG ACTGGAACAA GCACAACAAG GTCCGCATCA CCGAACGGTT CGTCCCGTTC GGCGACTACG CCAGCGGCCC GACCCTGCAG ACCTCGTTCA GCGCCGACTC CGGCCCGGAC ATCTTCCTGC TCAGCCCCGG CGACTTCCTG CGCTACCACA ACGCGGGCGT CCTGATGGAC CTCACGCCGT ACCTGCCCCA GTCGGTGCGC GACGACTACC TTCCCGGCAC TTTGGACAGC CGCAGCTTCG ACGGCAAGGT GTACGGTCTG CCCATCGAAA GCGAACCGTT GGCGCTGTTC TACAGCCACG ACGCCTTCGA GAAGGCCGGA CTGTCCGAAG CCGACGTTCC CGCCAACTGG GACCAGATGC TGGACGTGGC CGACAAACTC ACCACCGACC GCCGCTTCGG GCTGCTGTTC GAGACCAACC CCGGCTACTA CCAGAACTTC ACCTGGTACC CGTTCCTGTG GCAGGGCGGC GGATCGCCGG TGTCCAAGGA CCAGAAGAGC GGCCGCTTCG ACTCCAAGGC CACCGTGGAC GCGCTCGCGC TGTGGCAGGA CAGCATCAAC CGCCGGGTCG CTCCCACCCT GCCGCAGGGC TCGGGCGGCA TGGACACCAT CAGCAACCTC GGCAACGGCT ACTGCGCCAT GCAGCAGACC GGCGTGTGGG GAGTCGGCGA GCTCGGCATC CAGTTGCCGG ACTTCAAGTT CGGGGTGGCG CCGCTGCCGA AACCGCCGGG CGGCAAGGAC ATCACCACCG CGGGCGGCTG GGCCCTGGTC GCCAACGTGC GCGGCCGCAA CCCCGAGGCC GCCGCCGAGT TCATCGCCTG GGCGCTGGGC AGCGACGAGG ACGACTGCGT CGAACGGGGA CGCCAGCTCA ACACCGTCAT CAAGAAGAAC CTGCCGGTGC GCCGCAGCGT CCGCGACCTC GCCGAGAAGT CCGGCGACAT CGACACCGAC AACTACCGGA AGTTCGTGGA GGAGATCGCC CCGATCGCGG TCGGCGAACC CCGCTACCCG GTGGAGATCT ACCGGAGCAT CTCGGACGCC ATCCAGGCCT GCCAGCTGGA CGGCGCCGAC CCGGCCACCG TCGCGGCGGA CACGGACGAG CAGATCCAGA CGTTCGTGTC CACATACGAA GGAGCGTCGA TCCTGTGA
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Protein sequence | MSPGFGESRL SRRGLLRASA LGLGALGAGS LTACAGSNPD ELVFWHFVGP SSPQGKWQTT MVDDWNKHNK VRITERFVPF GDYASGPTLQ TSFSADSGPD IFLLSPGDFL RYHNAGVLMD LTPYLPQSVR DDYLPGTLDS RSFDGKVYGL PIESEPLALF YSHDAFEKAG LSEADVPANW DQMLDVADKL TTDRRFGLLF ETNPGYYQNF TWYPFLWQGG GSPVSKDQKS GRFDSKATVD ALALWQDSIN RRVAPTLPQG SGGMDTISNL GNGYCAMQQT GVWGVGELGI QLPDFKFGVA PLPKPPGGKD ITTAGGWALV ANVRGRNPEA AAEFIAWALG SDEDDCVERG RQLNTVIKKN LPVRRSVRDL AEKSGDIDTD NYRKFVEEIA PIAVGEPRYP VEIYRSISDA IQACQLDGAD PATVAADTDE QIQTFVSTYE GASIL
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