Gene Bxe_B0420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B0420 
Symbol 
ID4009091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp2908012 
End bp2909244 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content61% 
IMG OID637952257 
ProductABC sugar transporter, periplasmic ligand binding protein 
Protein accessionYP_554877 
Protein GI91779669 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTGC ATGCCCGTGC TTCCCTCGCG CTCGGCAAAG TTGCCGTGGC GCTCGCGTTT 
GCAGGTATCG CCGTCGCGGC TCACGCCGAC ACGGTCCGCG TGACCGTCGC GCACTACAGC
GACGCAACCG CGCCGTACTT CGAAAAGATG GCCCGCAACT TCGAGAAGGC CAATCCCGGC
ACCACCATCA AGATCGAAGA CGTGAACTGG GACACGCTGC AACAGAAACT GCAAACGGAC
ATTTCCGGTA ACGCCAACGC CGACCTCGCG ATCGTCGGCA CACGCTGGCT ACTCGATTTC
GTGAAGGACG ACGTCGCGGA ACCGCTCGAC GGTTATATGG ACGCAAGCTT CAAGAGCCGC
TTCATCGGTC CGTTCCTCGC CCCGGGTGAA ATCAACGGCA AGGTGTATGG CCTGCCGATC
GCCGCTTCGG CACGCGCGCT GTACTACAAC AAGGACCTGC TCGCGAAGGT CGGCTATCCC
GACGGTCCGA AGACCTGGAA CGACGTGATC GATGCGTCGA AGAAACTGAA GGCGCAGGGC
ATTGCCGGTT TCGGTCTGCA AGGCAAGGAA ATCGAAACGG ACGTCTACTA TTACTACGCG
CTGTGGACCA ATGGCGGCGA CGTGGTGGGC AAGGACAACA AGGCGGCGTT CAATTCGCCG
GCCGGCATCA AGGCGGCGAC GCTGTACAAA TCGATGATCG ACCAGGGTCT GACGCAACCC
GGCGTGACCG GCTACAGCCG CGAAGACGTG CAGAACCTCT TCAAGCAAGG CCGCGTTGCG
ATGGTGATTT CGGCGCCGTT CCTGTCGAAA CAGATCAGGA AGGAAGCGCC GAACCTGAAG
TACGGCATCG ATCCGATTCC GATGGGCACG ACGCACGCCA CGTACGCGGT CACGGACTCG
ATCGTGATGT TCAGGAACTC GAAGGTGAAG AAGTCGGCAT GGAAGTTCCT CGACTATCTG
TTCACGAAGG AACCGCGCGT GGAGTTCACC ACGACCGAAG GCTTCCTGCC GACCACCAAG
GCTGAATCCA CCGACCCGGC GTTCAACGAT CCGGACACGA AGGCGTTCGT CGCGTTGCTG
CCCACGGCCC GCTTTGCGCC GACGGTGACG GGTTGGGAAG ACACCGCGAA AGCCGTGACC
GACGCCATGC AGTCGATCTA CCTGGGCAAG GCGAAACCGG CCGACGCATT GAATGCGGCG
GCCACGCAGG CGAACAAGTC GCTCGGCAAG TAA
 
Protein sequence
MSLHARASLA LGKVAVALAF AGIAVAAHAD TVRVTVAHYS DATAPYFEKM ARNFEKANPG 
TTIKIEDVNW DTLQQKLQTD ISGNANADLA IVGTRWLLDF VKDDVAEPLD GYMDASFKSR
FIGPFLAPGE INGKVYGLPI AASARALYYN KDLLAKVGYP DGPKTWNDVI DASKKLKAQG
IAGFGLQGKE IETDVYYYYA LWTNGGDVVG KDNKAAFNSP AGIKAATLYK SMIDQGLTQP
GVTGYSREDV QNLFKQGRVA MVISAPFLSK QIRKEAPNLK YGIDPIPMGT THATYAVTDS
IVMFRNSKVK KSAWKFLDYL FTKEPRVEFT TTEGFLPTTK AESTDPAFND PDTKAFVALL
PTARFAPTVT GWEDTAKAVT DAMQSIYLGK AKPADALNAA ATQANKSLGK