| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2834 |
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| Symbol | |
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| ID | 3904746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3338094 |
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| End bp | 3339473 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637880155 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_481921 |
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| Protein GI | 86741521 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.873121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTCGAC CACGCCTGCT GCGTGCCGCG GCTGGCCTCG CGTTGCTTGC GGCGCTCGCC
TCCGCGTGTG CGACGTCCTC GTCCACACCC ACGAGTACGG CCGCGAACGC CAGCACGATC
CCCGAACTCT CCCCGGACCA GAAGGTCTCG ATCGTCTTCG AAAGTTACAA CCTCGCGAAC
GTCGGGACGT GGAAGCCGGT GATCGAGGGG CTGCTGCGCG ACTTCCAGGC CGCGCATCCC
AACATCACCG TCAAGGGCCA GCCGCCGCAG AACCTGGCCG GTAGCGCGAA CAGCGGCGAC
TACGTCACCA GCATCAAGAA CCAGGTGCTG GCAGGCAGCC CCCCGGACGT CGCCCAGATC
ACCTTCAACG CGCTGCGCTT CGCCGCCGGC AGCCTCGGCG CCCAGCCGCT CGACACGTTG
GTCGGGCGGG AGGCCGTTCA GGCGAACTTC GGCGGCGAAC ACCCGTTCGC CCCGAAAGCC
CGCACCCTCG GCGACGTTGA CGGCAAGACC TACGCCGTCC CGTACGTCTT CTCCACCCCG
GTTCTCTGGC TGAACAAGAC CCTGTTCACC CAGGCCGGCC TCGACCCGGC CAAGCCGCCG
AAGACCTGGG CGGAGGTAAA GACCGCGGCG CTTGCCATCA AGGCGAAGAC CGGCAAGGAC
GGGGTCCTCA TCGACTGTCT GACGAAGGTC GGGGACTGGT GTTTCCAGAG CCTGGTACGT
TCGGCCGGCG GCCGAGTGAT CTCCACCGAC GGTACCAAGC TGTCCTTCGC CGATCCGCCG
GGCGTCGAGG CGGTATCGAT GGCCGCCGAC CTGGTACACA GCGGCGTGAT GCCGAACCTT
GACCAGAAGC AGCAGGTCAA GGCGTTCAGC AGCGGTCAGG CCGGGATGCT GCTCGAAAGC
AGCTCCCTGC AAGGGATGTT CATGGCCGGC GCCAAGGCGA ACAACTGGCA GCTCGACGCC
ACCCAGGAAC CCTCGTTCGG CTCGAAGCCG GTCATCCCCA CCAACTCGGG AGCGGCACTG
GCGATCTTCA GTAAGGACCC GGCCAAGCAG CGCGCCGCCT GGGAACTGAT CAAGTTTCTC
ACCGGCGACC ACGCCTACAC CGAGATCTCC TCGAAGATCG GCTACCTGCC GCTGCGGACC
GGCCTGATCG ACGACCCGAA GAGCCTGCAG GCCTGGGCGA AGGCGAACCC GCTCATCAAG
CCGAACCTCG ACCAGCTCGC CCGGATCGAG CCGTGGGAGT CCTTCCCGGG TGACAACTAC
CTCCAGATCT CGGACACGAT GATGACCGCG GTCGAAAGCG CCGTCTTCAC CGGCAAGGAT
CCCGCATCCA CCCTGGCCGC CGCACAGAAG CAGGCCACCA GCTTCCTGCC CCGGAAGTGA
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| Protein sequence | MARPRLLRAA AGLALLAALA SACATSSSTP TSTAANASTI PELSPDQKVS IVFESYNLAN
VGTWKPVIEG LLRDFQAAHP NITVKGQPPQ NLAGSANSGD YVTSIKNQVL AGSPPDVAQI
TFNALRFAAG SLGAQPLDTL VGREAVQANF GGEHPFAPKA RTLGDVDGKT YAVPYVFSTP
VLWLNKTLFT QAGLDPAKPP KTWAEVKTAA LAIKAKTGKD GVLIDCLTKV GDWCFQSLVR
SAGGRVISTD GTKLSFADPP GVEAVSMAAD LVHSGVMPNL DQKQQVKAFS SGQAGMLLES
SSLQGMFMAG AKANNWQLDA TQEPSFGSKP VIPTNSGAAL AIFSKDPAKQ RAAWELIKFL
TGDHAYTEIS SKIGYLPLRT GLIDDPKSLQ AWAKANPLIK PNLDQLARIE PWESFPGDNY
LQISDTMMTA VESAVFTGKD PASTLAAAQK QATSFLPRK
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