Gene Rleg2_6572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_6572 
Symbol 
ID6983641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011371 
Strand
Start bp246854 
End bp248086 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content62% 
IMG OID643399567 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002284323 
Protein GI209552408 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00103217 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.480926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCC GCAAATATGC AATTCTCGGC GCTCTGGCGC TTGCAGGCGT TTCACTCTTC 
GGTCTTTCGG CCAAGGCCGA GGACGTCACG CTGACGCTCT GGTCGCTGGA TAAAGACACC
CAGCCGGCGC CCAATCTCGT CAAGGAATTC AACGCCCAGA ACAACGGCAT CAAGATCGAA
TACCGGCTGA TCCAGTTCGA CGACGTCGTC ACCGAGGCCA TGCGCGCCTA TGCCACCGGC
CAGGCGCCCG ATATCATCGC CGTCGACAAT CCGGAGCATG CGATGTTCTC ATCGCGCGGC
GCCTTCCTCG ACCTCACCGA CATGATCGCC AAGTCGACCG TCATCAAGCC GGACAACTAT
TTCCCCGGGC CGCTGAAATC GGTCGAATGG GAGGGCAAAT ATTTCGGCGT GCCGAAGGCG
ACGAACACGA TCGCGCTCTA CTACAACAAG GACATGTTCA AGGCCAAGGG CCTCGATCCG
AACAAGCCGC CGCAGACCTG GGACGAACTG GTCGAGGATG CGCGCAAGCT GACCGACCCC
GCCAAGAACG TCTACGGCCT GGCTTTTTCG GCCAAGGCCA ACGAGGAGGG GACCTTCCAG
TTCCTGCCCT GGGCGCAGAT GGGCGGCGGC AGCTATGAGC ACATCAATGC CGACGGCGCG
GTGAAGGCGC TCGGGATCTG GAAGACGATC ATGGACGAGA AGCTCGCTTC TCCCGATACG
CTGACACGCG GCCAGTGGGA TTCCACAGGC ACGTTCAACT CCGGCAATGC GGCCATGGCG
ATCTCCGGTC CCTGGGAACT CGACCGCATG ACGCAGGAAG CGAAATTCGA CTGGGGCGTC
ACCCTGCTTC CGGTTCCGAA GGAAGGGGCG GAACGATCCT CGGCCATGGG CGACTTCAAC
TGGGCGATCT TCGCCAGCAG CAAACATCCG GCCGAAGCCT TCAAGGCGCT CGAATATTTC
GCCTCGCAGG ACGACAAGAT GTTCAAGAAT TTCGGCCAGC TTCCGGCCCG TTCCGACATC
TCCATCCCCG AGAGCGGCCA GCCGCTGAAG GACGCCGCCC TCAAGGTCTT CCTCGAACAG
CTGAAATACG CCAAGCCGCG CGGGCCACAC CCGCAATGGC CGAAGATCTC CAAGGCGATC
CAGGACGCCA TCCAGGCGGC GCTGACCGGC CAGATGAGCC CGAAGGACGC GCTCGACCAG
GCCGCGGATA AGATCAAGGC TGTTCTAGGC TAG
 
Protein sequence
MAIRKYAILG ALALAGVSLF GLSAKAEDVT LTLWSLDKDT QPAPNLVKEF NAQNNGIKIE 
YRLIQFDDVV TEAMRAYATG QAPDIIAVDN PEHAMFSSRG AFLDLTDMIA KSTVIKPDNY
FPGPLKSVEW EGKYFGVPKA TNTIALYYNK DMFKAKGLDP NKPPQTWDEL VEDARKLTDP
AKNVYGLAFS AKANEEGTFQ FLPWAQMGGG SYEHINADGA VKALGIWKTI MDEKLASPDT
LTRGQWDSTG TFNSGNAAMA ISGPWELDRM TQEAKFDWGV TLLPVPKEGA ERSSAMGDFN
WAIFASSKHP AEAFKALEYF ASQDDKMFKN FGQLPARSDI SIPESGQPLK DAALKVFLEQ
LKYAKPRGPH PQWPKISKAI QDAIQAALTG QMSPKDALDQ AADKIKAVLG