| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1459 |
|---|
| Symbol | |
|---|
| ID | 4415928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 1372756 |
|---|
| End bp | 1374129 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639669633 |
|---|
| Product | ABC-type sugar transport system, periplasmic component |
|---|
| Protein accession | YP_810985 |
|---|
| Protein GI | 116491441 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATC AGAAGAGAGT TATTTATAAC TTAATCATCG TTCTTACGGT TGCGTTTTTA
TCTTTGCTCC CAGTTAGTTT GTTGGGCAAC AAGCAGGCCT CTGCAGCCGA CAATTCCAAA
AGAATTAAAA TTGTTTTTTG GCATGAGATG ACCGGACCGG CACAAACGCA ACTCAACGAA
TTCGTCAAAC AATTCAATAA ATCGCAAAGC AAATATCAAG TCGTTTCTCA ATTTGAAGGA
ACTTACGAAG AAGCCGTTCA AAAAATCTTA AACACACATG AAAGCAATAC TTCTCCGGCC
GTTTTTCAAT CAGCTGATAT TTCAGTCAGC CAACTTTATC ACAGCGGCTA TATCACGAAG
GTCCAAAAGT TCATCGATAA AGACAAGAGT TTTAACGTAA ACGATATATC CTCGGTTGCC
CGAGCCTTTT ATAGTCAAAA AGGAGAGCTA TTGGGGATGC CCTTTAATAC ATCGCAACCA
GTTCTTTACT ACAATGCGTC GTTATTAAAA AAATATAATA TCACTCCGCC GCCAATGAAT
CCAAGTTATA GCGATATCAC TCGCGTGGCA AAACAGCTCT ATCAAAGATC AAACAAAAAA
GTCAAAGGAA TGACAATGGA AGTTTATGGC TGGCTATTCG ACCAATTGAT TGCAAATTCC
GGCAACTATA GCGTTAACAA TCAAAACGGT CGTCTAGCAA CACCAACAAA AGCTTCTTTC
ATTAATTCCG GTTCGCTGAA AGCGATGGAA TGGATCCAAG AAAACGTTAA AAGCGGCGAC
TTTATAAATT ACGGTTCCGG TACAAACGCC TCAGCCAATG AAATGGCAGC CTTTTTATCC
GGAAAATTGG GTATATTCAT GGAATCATCA GCCGATATCG GCCAGTTGAC TCTCGGCATG
AAAAATCAAA AACTTGGTGT AACCTACTAT CCTCATGCTG ACGGCCAAAA AGCCAACGGC
GTCGCAATTG GTGGTGCCGC TCTTTGGATC AGCAACGATA AAAGCTCAGA AGTCCAGCAA
GGCGCCTGGA ATTTTATTAA ATACCTGGAA AGCGCCAAAA ATCAAGCTAC CTGGCAAAAA
GCAACCGGCT ATCTGGCTTT GAATAAGAAC TCGAAAAAGA CAAAAACTTT GAAAAATCTT
TATAAAAAGA ATCCAGCGCT AAAGGTTCCC AGCGAACAAT TAGCCAAGAC CGTTCCAAAC
AATTCCAACT CGGGAATCTT TGTCGAAGGA ATTGTCCAGG AAAGAATAAT TCTCAACACA
GCCCTTGATC AAATTTATAA CGGCAGCAAT ATAAAAAGCT CTTTGACTCA GGCTGAGGAA
GCTATGAATA GTTACATTAA AAATAATAAT CGAGCCAACG GTTGGCGTTA TTAA
|
|---|
| Protein sequence | MKNQKRVIYN LIIVLTVAFL SLLPVSLLGN KQASAADNSK RIKIVFWHEM TGPAQTQLNE
FVKQFNKSQS KYQVVSQFEG TYEEAVQKIL NTHESNTSPA VFQSADISVS QLYHSGYITK
VQKFIDKDKS FNVNDISSVA RAFYSQKGEL LGMPFNTSQP VLYYNASLLK KYNITPPPMN
PSYSDITRVA KQLYQRSNKK VKGMTMEVYG WLFDQLIANS GNYSVNNQNG RLATPTKASF
INSGSLKAME WIQENVKSGD FINYGSGTNA SANEMAAFLS GKLGIFMESS ADIGQLTLGM
KNQKLGVTYY PHADGQKANG VAIGGAALWI SNDKSSEVQQ GAWNFIKYLE SAKNQATWQK
ATGYLALNKN SKKTKTLKNL YKKNPALKVP SEQLAKTVPN NSNSGIFVEG IVQERIILNT
ALDQIYNGSN IKSSLTQAEE AMNSYIKNNN RANGWRY
|
|---|
| |