Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2418 |
Symbol | |
ID | 8333767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2735850 |
End bp | 2737193 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644955571 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003113177 |
Protein GI | 256391613 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGC GCATCACCGC GGCCGCCGGC CTGGCCGCCC TCGCCTTGAC CGCCACGGCC TGTGCCGGCG GCGGGACCTC CACGCCGAAG TCCGACGGCG GCTCCTCCGC CAAGAGCACC GGCTCCGGCA CCGAGCTCGC GGTGCCCGCC GGCCCGGTCA CCATCACCTT CGAGGAGGCG ATGACGATCG GCACGCTGAA GCCGGCGATG GACAAGCTGG TCTCGGACTT CCAGGCCAAG TACCCGAACA TCACGGTCAA GCTCCAGGGC GAGCCGGACT ACGCCACGAT GTACACCAAG GAGAAGGCCG AGGTGCAGGC CGGGAACGCC CCGACCATCG GCCAGGCCTA CGAGAGCTGG GCCTCCTACT TCCAGTCCTC CGGCGTGCTG GCGCCGATCA GCGACCTGGC CGGGACCGAC ACCCCGCCGG CGATGTCCAC GTTCTACAAG GGCATCCAGG CCGACATGAA GCTGCCGGAC GGCAAGACCT GGATGTGGCC GTTCAACAAG AGCGTGCTGA TCCTGTTCTA CAACGCCGAC CTGATGGCCA AGGACGGTCA GAGCGAGCCC AAGACCTGGG ACGACTACGC CAGCGTCATG AAGGCGGTCT CCAAGGACGG CGTCACCGGC TCCACGGTCG ACCCGGGCTC GGCCAAGGCC GCGCAGTACG GCACGCAGTG GTTCGAGATC CTGGCCAAGG CCAACGGCGC GACCCTGTAC GACGCCGACG GCACCCCGCA CCTGAACGAC CCCGGCGTGG TCAAGGCCCT GCAGTACATG AAGGACCTCA AGGACGCCAA CGCGCTGGCG ACCGGGACCA ACTACCCCGG CGAGACCGCG CTGGGCGCCC AGAAGGGCAT GTTCGACATC TCCTCGGCGG CCGGCTACGG CTTCGAGAAC AAGACCGTCG GCGGCAAGTT CAAGCTCGGC ATCAGCGCGC TGCCCTCGGG CCCGGCCGGC GCCGTGAACC AGCTGACCGG GACCAACATA GTGGTCTTCA AATCCGCCAG CGCCGACCAG AAGGCGGCGG CCTGGGCGTT CCTGAAGTTC ATCACCAGCC CCGCCGAGCA GGCGCAGTGG GCGGCGACCT CCGGCTACCT GCCGGTGACC AGCCAGGCCC TCTCCGACCC GGTGCTGCAG GCCTTCGTGG CCAAGAACCC GTATGAGACC GCCGCGGTCT CCGAGCTCGA CACCGCCTTC ACCCTGCCCG GCTTCTCCTG GATCTTCCAG TGCCAGGGCT ATGAGGCCAC CGCGATCCAG GAGGCGCTGG AGAACGGCAA GCAGCCCTCT GACGCGCTGA ACACCGCGCA GTCCGCCTGC GCCGCCGCGA AGGCACAGGG GTGA
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Protein sequence | MRKRITAAAG LAALALTATA CAGGGTSTPK SDGGSSAKST GSGTELAVPA GPVTITFEEA MTIGTLKPAM DKLVSDFQAK YPNITVKLQG EPDYATMYTK EKAEVQAGNA PTIGQAYESW ASYFQSSGVL APISDLAGTD TPPAMSTFYK GIQADMKLPD GKTWMWPFNK SVLILFYNAD LMAKDGQSEP KTWDDYASVM KAVSKDGVTG STVDPGSAKA AQYGTQWFEI LAKANGATLY DADGTPHLND PGVVKALQYM KDLKDANALA TGTNYPGETA LGAQKGMFDI SSAAGYGFEN KTVGGKFKLG ISALPSGPAG AVNQLTGTNI VVFKSASADQ KAAAWAFLKF ITSPAEQAQW AATSGYLPVT SQALSDPVLQ AFVAKNPYET AAVSELDTAF TLPGFSWIFQ CQGYEATAIQ EALENGKQPS DALNTAQSAC AAAKAQG
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