More than 300 homologs were found in PanDaTox collection
for query gene Apre_0255 on replicon NC_013171
Organism: Anaerococcus prevotii DSM 20548



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013171  Apre_0255  extracellular solute-binding protein family 1  100 
 
 
439 aa  887    Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1638  ABC-type sugar transport system, periplasmic component  42.03 
 
 
434 aa  316  5e-85  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.0000325816  normal 
 
 
-
 
NC_008530  LGAS_1846  ABC-type sugar transport system, periplasmic component  43.45 
 
 
442 aa  310  2.9999999999999997e-83  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00000328949  hitchhiker  0.000299807 
 
 
-
 
NC_009616  Tmel_0270  extracellular solute-binding protein  29.32 
 
 
419 aa  173  5.999999999999999e-42  Thermosipho melanesiensis BI429  Bacteria  normal  0.562219  n/a   
 
 
-
 
NC_009718  Fnod_0188  extracellular solute-binding protein  30.55 
 
 
420 aa  167  4e-40  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0322  extracellular solute-binding protein  30.77 
 
 
419 aa  165  2.0000000000000002e-39  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0340  extracellular solute-binding protein  30.66 
 
 
419 aa  164  3e-39  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1068  extracellular solute-binding protein  27.18 
 
 
429 aa  148  2.0000000000000003e-34  Petrotoga mobilis SJ95  Bacteria  normal  0.501776  n/a   
 
 
-
 
NC_013205  Aaci_2049  extracellular solute-binding protein family 1  30.43 
 
 
438 aa  132  1.0000000000000001e-29  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.266449  n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  28.28 
 
 
436 aa  121  1.9999999999999998e-26  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  26.39 
 
 
445 aa  118  1.9999999999999998e-25  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  29.97 
 
 
448 aa  115  1.0000000000000001e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  26.51 
 
 
441 aa  114  4.0000000000000004e-24  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0061  extracellular solute-binding protein family 1  26.24 
 
 
462 aa  112  1.0000000000000001e-23  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2535  extracellular solute-binding protein family 1  27.96 
 
 
418 aa  111  2.0000000000000002e-23  Meiothermus ruber DSM 1279  Bacteria  normal  0.105932  normal 
 
 
-
 
NC_014212  Mesil_2057  extracellular solute-binding protein family 1  26.77 
 
 
421 aa  110  4.0000000000000004e-23  Meiothermus silvanus DSM 9946  Bacteria  normal  0.112802  normal  0.296802 
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  27.06 
 
 
437 aa  109  1e-22  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.52 
 
 
458 aa  107  6e-22  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.29 
 
 
458 aa  106  9e-22  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  25.29 
 
 
458 aa  105  1e-21  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  25.29 
 
 
458 aa  105  1e-21  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.29 
 
 
458 aa  105  1e-21  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.29 
 
 
458 aa  105  1e-21  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  25.29 
 
 
458 aa  105  1e-21  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.29 
 
 
458 aa  105  1e-21  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.06 
 
 
458 aa  105  2e-21  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  27.27 
 
 
437 aa  104  3e-21  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  26.4 
 
 
458 aa  102  1e-20  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  26.68 
 
 
439 aa  102  1e-20  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  27.01 
 
 
437 aa  100  5e-20  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_013131  Caci_2418  extracellular solute-binding protein family 1  26.55 
 
 
447 aa  100  8e-20  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  26.22 
 
 
444 aa  99.4  1e-19  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_012669  Bcav_1508  extracellular solute-binding protein family 1  27.3 
 
 
451 aa  98.2  2e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.55774  normal 
 
 
-
 
NC_011831  Cagg_2195  extracellular solute-binding protein family 1  24.84 
 
 
450 aa  97.8  3e-19  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0322  extracellular solute-binding protein family 1  25.74 
 
 
435 aa  95.9  1e-18  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  27.05 
 
 
423 aa  94.4  4e-18  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  23.91 
 
 
410 aa  93.2  8e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  23.91 
 
 
410 aa  93.2  8e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_00790  ABC-type sugar transport system, periplasmic component  25 
 
 
437 aa  92  2e-17  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.312494  normal  0.191801 
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  25.53 
 
 
414 aa  90.5  6e-17  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_4040  extracellular solute-binding protein family 1  25.76 
 
 
434 aa  90.1  7e-17  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_30840  ABC-type sugar transport system, periplasmic component  27.03 
 
 
463 aa  89.4  1e-16  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12848  sn-glycerol-3-phosphate-binding lipoprotein ugpB  24.6 
 
 
436 aa  89  1e-16  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000142723  normal 
 
 
-
 
NC_007802  Jann_2075  extracellular solute-binding protein  24.77 
 
 
433 aa  88.6  2e-16  Jannaschia sp. CCS1  Bacteria  normal  0.114781  normal  0.235936 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  24.31 
 
 
407 aa  89  2e-16  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_29870  carbohydrate-binding protein  26.86 
 
 
448 aa  88.6  2e-16  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03302  glycerol-3-phosphate transporter subunit  25.82 
 
 
438 aa  87.8  3e-16  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0262  extracellular solute-binding protein family 1  25.82 
 
 
438 aa  87.8  3e-16  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4767  glycerol-3-phosphate transporter periplasmic binding protein  25.82 
 
 
438 aa  87.8  3e-16  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.552805 
 
 
-
 
NC_012892  B21_03255  hypothetical protein  25.82 
 
 
438 aa  87.8  3e-16  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3650  glycerol-3-phosphate transporter periplasmic binding protein  25.82 
 
 
438 aa  87.8  3e-16  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_0263  glycerol-3-phosphate transporter periplasmic binding protein  25.82 
 
 
438 aa  87.8  3e-16  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0655  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  23.9 
 
 
433 aa  87.4  5e-16  Brucella suis 1330  Bacteria  normal  0.454035  n/a   
 
 
-
 
NC_010658  SbBS512_E3870  glycerol-3-phosphate transporter periplasmic binding protein  25.82 
 
 
438 aa  87  6e-16  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3750  extracellular solute-binding protein  23.48 
 
 
433 aa  87  6e-16  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.316129  n/a   
 
 
-
 
NC_010498  EcSMS35_3732  glycerol-3-phosphate transporter periplasmic binding protein  25.82 
 
 
438 aa  86.7  7e-16  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_3931  glycerol-3-phosphate transporter periplasmic binding protein  25.55 
 
 
438 aa  86.7  8e-16  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  24.5 
 
 
425 aa  86.3  9e-16  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_009654  Mmwyl1_0604  extracellular solute-binding protein  23.41 
 
 
433 aa  85.9  0.000000000000001  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00010036 
 
 
-
 
NC_009523  RoseRS_4566  extracellular solute-binding protein  25.68 
 
 
453 aa  86.3  0.000000000000001  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_3710  extracellular solute-binding protein  25.71 
 
 
431 aa  86.3  0.000000000000001  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00279907  normal 
 
 
-
 
NC_002967  TDE2076  hypothetical protein  25.45 
 
 
492 aa  85.1  0.000000000000002  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1264  glycerol-3-phosphate-binding periplasmic lipoprotein signal peptide  23.65 
 
 
438 aa  85.1  0.000000000000002  Ralstonia solanacearum GMI1000  Bacteria  normal  0.400828  normal  0.517414 
 
 
-
 
NC_012852  Rleg_6261  extracellular solute-binding protein family 1  23.24 
 
 
428 aa  85.5  0.000000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.689417 
 
 
-
 
NC_012669  Bcav_0894  extracellular solute-binding protein family 1  26.55 
 
 
470 aa  85.1  0.000000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.444762  normal  0.144357 
 
 
-
 
NC_011886  Achl_2663  extracellular solute-binding protein family 1  24.87 
 
 
468 aa  85.5  0.000000000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  33.12 
 
 
437 aa  85.1  0.000000000000002  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4289  extracellular solute-binding protein  23.96 
 
 
466 aa  84.7  0.000000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0646  extracellular solute-binding protein  25.59 
 
 
441 aa  84.3  0.000000000000003  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.206924 
 
 
-
 
NC_013521  Sked_18880  carbohydrate-binding protein  26.12 
 
 
460 aa  84.3  0.000000000000004  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal  0.173455 
 
 
-
 
NC_012791  Vapar_4001  extracellular solute-binding protein family 1  23.65 
 
 
442 aa  84.3  0.000000000000004  Variovorax paradoxus S110  Bacteria  normal  0.131149  n/a   
 
 
-
 
NC_008783  BARBAKC583_0349  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  26.53 
 
 
441 aa  84.3  0.000000000000004  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06396  ABC-type sugar transport system periplasmic protein  25.57 
 
 
435 aa  84.3  0.000000000000004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_0113  extracellular solute-binding protein  24.7 
 
 
455 aa  84  0.000000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.270734  normal 
 
 
-
 
NC_013174  Jden_2244  extracellular solute-binding protein family 1  27.3 
 
 
455 aa  84  0.000000000000005  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.846858 
 
 
-
 
NC_007963  Csal_2738  extracellular solute-binding protein  23.3 
 
 
438 aa  83.2  0.000000000000008  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.345118  n/a   
 
 
-
 
NC_007925  RPC_0404  extracellular solute-binding protein  25.47 
 
 
438 aa  82.8  0.00000000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_3962  glycerol-3-phosphate transporter periplasmic binding protein  23.45 
 
 
439 aa  82.4  0.00000000000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0256  glycerol-3-phosphate transporter periplasmic binding protein  23.45 
 
 
439 aa  82.4  0.00000000000001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0297  extracellular solute-binding protein family 1  23.6 
 
 
453 aa  82.8  0.00000000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0248346 
 
 
-
 
NC_012856  Rpic12D_1185  extracellular solute-binding protein family 1  23.44 
 
 
438 aa  82  0.00000000000002  Ralstonia pickettii 12D  Bacteria  normal  0.276437  normal 
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  24.71 
 
 
431 aa  82  0.00000000000002  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_007973  Rmet_2055  extracellular solute-binding protein  25.37 
 
 
436 aa  82  0.00000000000002  Cupriavidus metallidurans CH34  Bacteria  normal  0.822621  normal 
 
 
-
 
NC_010003  Pmob_0954  extracellular solute-binding protein  22.89 
 
 
399 aa  82  0.00000000000002  Petrotoga mobilis SJ95  Bacteria  normal  0.0450213  n/a   
 
 
-
 
NC_010159  YpAngola_A3655  glycerol-3-phosphate transporter periplasmic binding protein  23.45 
 
 
439 aa  82.4  0.00000000000002  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1092  extracellular solute-binding protein family 1  24.63 
 
 
438 aa  82  0.00000000000002  Ralstonia pickettii 12J  Bacteria  normal  0.0503452  normal 
 
 
-
 
NC_011992  Dtpsy_2659  extracellular solute-binding protein family 1  25.21 
 
 
431 aa  82.4  0.00000000000002  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00136924  n/a   
 
 
-
 
NC_009504  BOV_A0617  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  23.63 
 
 
444 aa  82  0.00000000000002  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2948  extracellular solute-binding protein  25.26 
 
 
448 aa  81.6  0.00000000000003  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  24.93 
 
 
431 aa  81.3  0.00000000000003  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0186  extracellular solute-binding protein  26.49 
 
 
441 aa  81.3  0.00000000000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008528  OEOE_1459  ABC-type sugar transport system, periplasmic component  24.65 
 
 
457 aa  81.3  0.00000000000004  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3869  glycerol-3-phosphate transporter periplasmic binding protein  24.26 
 
 
438 aa  80.5  0.00000000000005  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3759  glycerol-3-phosphate transporter periplasmic binding protein  24.26 
 
 
438 aa  80.5  0.00000000000005  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0475  extracellular solute-binding protein family 1  24.22 
 
 
397 aa  80.9  0.00000000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  24.26 
 
 
438 aa  80.5  0.00000000000005  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_4022  extracellular solute-binding protein  23.81 
 
 
431 aa  80.5  0.00000000000005  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_013202  Hmuk_0332  extracellular solute-binding protein family 1  24.71 
 
 
468 aa  80.5  0.00000000000005  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_007494  RSP_3290  ABC glycerol-3-phosphate transporter, periplasmic binding protein, UgpB  23.81 
 
 
431 aa  80.1  0.00000000000006  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  25.22 
 
 
424 aa  80.1  0.00000000000007  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
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