| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0734 |
|---|
| Symbol | |
|---|
| ID | 8415024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 924359 |
|---|
| End bp | 925834 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645023705 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003181102 |
|---|
| Protein GI | 257790496 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.843476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA ATGTCATAGG GCGCGCGGGC ACGGCTTTCG CGCTTGTCGG CGCTTTGGCG
CTTGCGGGTT GCTCGGGTTC TTCGGCGCCC TCGGAGGATG CGGTTTCGTC CGTGCTCGAC
CCGTCCGATC CGGTGCAGGT GGAGCTGTGG ACCTATTACA ACGGCACGCA GCAGCAGGCT
TTCGAAGACC TCGTCAAGGA CTTCAATGCG ACGAAAGGCA AGGATCTCGG CATCGTGGTG
ACCAGCTCCA GCCAAGGCGG CGTCAACGAC CTGGCCTCCG CCGTCACCGA TTCCGCGCAG
GAGCTTGTGG GTTCGGAGGC GATGCCCGAC GCGTTCCTGT CGTATTCCGA TACGGCGTCG
GTCATAGACG GGTTCGGCAT GGTGGCCGAT CTGTCGGGCT ACCTTACTGA AGAGGAGAAG
GCCGGATTCG TGGAGGGCTT TCTGGAAGAG GGCGATCTGA ACGGCAACGG CAGCCTCAAA
GTGTTCCCGG TGGGCAAGTC CACCGAGACG CTGCAGATCA ACATGACCGA TTTCCAGACG
TTCGCCGATG CCACCGGCAC TTCGCTCGAC GAGATGAGCA CCATTGAGGG CATCGTGAGA
GTCGCGGAGC GCTACTACGA GTGGACCGAC GCGCAGACGC CGGGCGTCAT GGGTGACGGC
CGTCCGTTCT TCGGACGCGA TGCTATGGCG AACTACCTGA TCACAGGTTC AAAACAGCTG
GGTCACGAGA TTTTTGAAAT TGAGAACGGC GTGTGCGCGC TGAACTTCGA CCGCGCTACG
ATGAAGACGC TCTGGGACAA CTACTACGTG CCCATGGTGC AGGGCTGGTT CTCGGCGGAG
GGCAAGTTCC GTTCGGATGC GGTGAAGACG GGCGATCTCA TCTGCTATGT GGGCTCATCG
TCCTCGGTGG TGTACTTCCC GCAAACAGTG ACGGTGGACG ATGCCACGAG CTATCCTATC
CAGTTGGACG CGTTGCCCAA CCCGTCTTTC GAGCACGGCA AGCCGTGCTC GCCGCAGCAG
GGCGCCGGGT TCGTGGTGAC GAAGTCCGAC GAGAAAAAGG AAACTGCGTG CGTCGAGTTC
CTCAAGTGGT TCACCGCTAA AGAGCAGAAC ACCGACTTCT CGGTGAGCGC CGGCTACGTG
CCGGTCACCA AGGATGCGCT GACGCTTGAG AACCTCCAGG CGGCGGCCGA GTCGATCGAC
GGCGCTTCGG GCAACTATCT GGTGAACCTG CCTGCCACGC TGGATACCAT CGAGGCCGGT
GTGTACGCGA ACCCGCCGTT CAAAGGCGGC GTTGAGGCGC GCGCCGTCCT TGACCGCGCG
CTGTCGGACA GGGCGGTGGC CGATCGTGCG GCGGTGGTCG AAGCAATGGC GGCGGGAGCA
TCGTCCGAAG AGGCTGTGGC TTCGTATCTC GACGACGCAG GGTTCGACGC TTGGCTCGCC
GACCTGGAGA CCCAGCTCAG GGAAGCGATC GCTTAA
|
|---|
| Protein sequence | MKKNVIGRAG TAFALVGALA LAGCSGSSAP SEDAVSSVLD PSDPVQVELW TYYNGTQQQA
FEDLVKDFNA TKGKDLGIVV TSSSQGGVND LASAVTDSAQ ELVGSEAMPD AFLSYSDTAS
VIDGFGMVAD LSGYLTEEEK AGFVEGFLEE GDLNGNGSLK VFPVGKSTET LQINMTDFQT
FADATGTSLD EMSTIEGIVR VAERYYEWTD AQTPGVMGDG RPFFGRDAMA NYLITGSKQL
GHEIFEIENG VCALNFDRAT MKTLWDNYYV PMVQGWFSAE GKFRSDAVKT GDLICYVGSS
SSVVYFPQTV TVDDATSYPI QLDALPNPSF EHGKPCSPQQ GAGFVVTKSD EKKETACVEF
LKWFTAKEQN TDFSVSAGYV PVTKDALTLE NLQAAAESID GASGNYLVNL PATLDTIEAG
VYANPPFKGG VEARAVLDRA LSDRAVADRA AVVEAMAAGA SSEEAVASYL DDAGFDAWLA
DLETQLREAI A
|
|---|
| |