Gene LGAS_1846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1846 
Symbol 
ID4439207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1836287 
End bp1837615 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content34% 
IMG OID639673662 
ProductABC-type sugar transport system, periplasmic component 
Protein accessionYP_819539 
Protein GI116630386 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000328949 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.000299807 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCTTCAAT TTTTAAATTA CTGGAGGATT TTGATGAATT TATATAAAAA GATTGCTTTA 
GGTTTAGTTG CAGGGGTGGC ATTAATTGCT ACTGGATGTT CAAAAGAAAA TAAAGAAGAT
AGTTCAGCAG CAAATATTCC AACTAAAATT ACAAAGAAAA CTACGGTAAC CTTTTGGCAT
GGAATGAATG GTGGTCAGCG TGCAGAATTA GAGAAATTAA CTGCAGAATT TGAAAAGAAA
AATCCTAATA TTAAAATCAA GCTTGAAAAT CAGGGTTCTT ACATTGATTT ACAAGCCAAG
GTAAATTCGA CACTACAATC GCCAAATAAT TTACCAACAA TTACGCAAGC ATATCCTGGT
TGGCTCTATA ATGCTGCTAA GAGTAATATG TTGGTTGATC TTTCCTCATA CATTAATAAC
AGTAAGCTCG GTTGGGGAAG TGCTACTAAG TCAAATATTA GAACTGAATT ATTGGATGGA
GCTAAAATTC AAGGAAAACA ATACGGTATT CCATTTAATA AATCTATTGA AGTTTTAACC
TATAACAAGT CCATGTTTGA AAAATATGGT ATTAAAAAAG TTCCTACAAC TATGAAGGAA
TTAGCACAAG TTTCAGAAAC TATTTATAAG AAGAGTAACC ATCAAGTTAT TGGTGCAGGT
TTTGATTCTT TAGCTAATTA CTATACTTTG GGTATGAAAA ATGAAGGAAT TAATTTAACT
GATAAAGTTA ACTTTACTGG TAAAGATTCC AAGAAAGTTA TTGATTACTA CGCTCAAGGT
ATGAAGAAGG GCTACTTTAC AACTGCTGGT TCAGCACACT ACTTATCAGG TCCATTTGCT
AATGAAAAGG TAGCAATGTA TATTGGAACA TCAGCAGGTG AAGGCTACGT TAAAAAGGCA
GTCGGTGATA AGTTTACTTA TGATGTAGCT GCGCGTCCTG GTAAATATAC TATGCAGCAA
GGTACTGATA TTTATATGTT TAAAAAAGCA ACAGCAACGC AAAGAACTGC CGCATTTAAA
TATATGCAAT TTTTAACTTC TAAATCTACT CAACTTAAAT GGGCAAATGC AACTGGCTAT
ATTCCAGTTA ATGATTCTGT TGTGAAATCT AAAGAATACA AAGAAAACAC CAAGACTAAG
CTTCCAGCTA AGCTAGAAGG GGCTATGAAA CACTTGTACA GTATTCCAGT AGCTAAGAAC
TCAAACGCTG CCTATAGTCA ATTAGATCCA ATTATGGCTA AGATTTTGTA TGCAGCTAAG
AATGGTCAAA ATGTTGATAA TCAAATTAAA GCAGGTAAAG CAAAATTTGA TGCAGCGTGG
AAGCAATAA
 
Protein sequence
MLQFLNYWRI LMNLYKKIAL GLVAGVALIA TGCSKENKED SSAANIPTKI TKKTTVTFWH 
GMNGGQRAEL EKLTAEFEKK NPNIKIKLEN QGSYIDLQAK VNSTLQSPNN LPTITQAYPG
WLYNAAKSNM LVDLSSYINN SKLGWGSATK SNIRTELLDG AKIQGKQYGI PFNKSIEVLT
YNKSMFEKYG IKKVPTTMKE LAQVSETIYK KSNHQVIGAG FDSLANYYTL GMKNEGINLT
DKVNFTGKDS KKVIDYYAQG MKKGYFTTAG SAHYLSGPFA NEKVAMYIGT SAGEGYVKKA
VGDKFTYDVA ARPGKYTMQQ GTDIYMFKKA TATQRTAAFK YMQFLTSKST QLKWANATGY
IPVNDSVVKS KEYKENTKTK LPAKLEGAMK HLYSIPVAKN SNAAYSQLDP IMAKILYAAK
NGQNVDNQIK AGKAKFDAAW KQ