Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1846 |
Symbol | |
ID | 4439207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1836287 |
End bp | 1837615 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639673662 |
Product | ABC-type sugar transport system, periplasmic component |
Protein accession | YP_819539 |
Protein GI | 116630386 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000328949 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.000299807 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCTTCAAT TTTTAAATTA CTGGAGGATT TTGATGAATT TATATAAAAA GATTGCTTTA GGTTTAGTTG CAGGGGTGGC ATTAATTGCT ACTGGATGTT CAAAAGAAAA TAAAGAAGAT AGTTCAGCAG CAAATATTCC AACTAAAATT ACAAAGAAAA CTACGGTAAC CTTTTGGCAT GGAATGAATG GTGGTCAGCG TGCAGAATTA GAGAAATTAA CTGCAGAATT TGAAAAGAAA AATCCTAATA TTAAAATCAA GCTTGAAAAT CAGGGTTCTT ACATTGATTT ACAAGCCAAG GTAAATTCGA CACTACAATC GCCAAATAAT TTACCAACAA TTACGCAAGC ATATCCTGGT TGGCTCTATA ATGCTGCTAA GAGTAATATG TTGGTTGATC TTTCCTCATA CATTAATAAC AGTAAGCTCG GTTGGGGAAG TGCTACTAAG TCAAATATTA GAACTGAATT ATTGGATGGA GCTAAAATTC AAGGAAAACA ATACGGTATT CCATTTAATA AATCTATTGA AGTTTTAACC TATAACAAGT CCATGTTTGA AAAATATGGT ATTAAAAAAG TTCCTACAAC TATGAAGGAA TTAGCACAAG TTTCAGAAAC TATTTATAAG AAGAGTAACC ATCAAGTTAT TGGTGCAGGT TTTGATTCTT TAGCTAATTA CTATACTTTG GGTATGAAAA ATGAAGGAAT TAATTTAACT GATAAAGTTA ACTTTACTGG TAAAGATTCC AAGAAAGTTA TTGATTACTA CGCTCAAGGT ATGAAGAAGG GCTACTTTAC AACTGCTGGT TCAGCACACT ACTTATCAGG TCCATTTGCT AATGAAAAGG TAGCAATGTA TATTGGAACA TCAGCAGGTG AAGGCTACGT TAAAAAGGCA GTCGGTGATA AGTTTACTTA TGATGTAGCT GCGCGTCCTG GTAAATATAC TATGCAGCAA GGTACTGATA TTTATATGTT TAAAAAAGCA ACAGCAACGC AAAGAACTGC CGCATTTAAA TATATGCAAT TTTTAACTTC TAAATCTACT CAACTTAAAT GGGCAAATGC AACTGGCTAT ATTCCAGTTA ATGATTCTGT TGTGAAATCT AAAGAATACA AAGAAAACAC CAAGACTAAG CTTCCAGCTA AGCTAGAAGG GGCTATGAAA CACTTGTACA GTATTCCAGT AGCTAAGAAC TCAAACGCTG CCTATAGTCA ATTAGATCCA ATTATGGCTA AGATTTTGTA TGCAGCTAAG AATGGTCAAA ATGTTGATAA TCAAATTAAA GCAGGTAAAG CAAAATTTGA TGCAGCGTGG AAGCAATAA
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Protein sequence | MLQFLNYWRI LMNLYKKIAL GLVAGVALIA TGCSKENKED SSAANIPTKI TKKTTVTFWH GMNGGQRAEL EKLTAEFEKK NPNIKIKLEN QGSYIDLQAK VNSTLQSPNN LPTITQAYPG WLYNAAKSNM LVDLSSYINN SKLGWGSATK SNIRTELLDG AKIQGKQYGI PFNKSIEVLT YNKSMFEKYG IKKVPTTMKE LAQVSETIYK KSNHQVIGAG FDSLANYYTL GMKNEGINLT DKVNFTGKDS KKVIDYYAQG MKKGYFTTAG SAHYLSGPFA NEKVAMYIGT SAGEGYVKKA VGDKFTYDVA ARPGKYTMQQ GTDIYMFKKA TATQRTAAFK YMQFLTSKST QLKWANATGY IPVNDSVVKS KEYKENTKTK LPAKLEGAMK HLYSIPVAKN SNAAYSQLDP IMAKILYAAK NGQNVDNQIK AGKAKFDAAW KQ
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