More than 300 homologs were found in PanDaTox collection
for query gene TRQ2_0340 on replicon NC_010483
Organism: Thermotoga sp. RQ2



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010483  TRQ2_0340  extracellular solute-binding protein  100 
 
 
419 aa  861    Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0322  extracellular solute-binding protein  97.14 
 
 
419 aa  845    Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0270  extracellular solute-binding protein  75.89 
 
 
419 aa  678    Thermosipho melanesiensis BI429  Bacteria  normal  0.562219  n/a   
 
 
-
 
NC_009718  Fnod_0188  extracellular solute-binding protein  69.45 
 
 
420 aa  629  1e-179  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1068  extracellular solute-binding protein  45.52 
 
 
429 aa  370  1e-101  Petrotoga mobilis SJ95  Bacteria  normal  0.501776  n/a   
 
 
-
 
NC_013205  Aaci_2049  extracellular solute-binding protein family 1  31.66 
 
 
438 aa  197  3e-49  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.266449  n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  31.82 
 
 
436 aa  179  7e-44  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  31.44 
 
 
445 aa  178  1e-43  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1638  ABC-type sugar transport system, periplasmic component  32.02 
 
 
434 aa  176  6e-43  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.0000325816  normal 
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  29.56 
 
 
437 aa  167  5e-40  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  29.25 
 
 
437 aa  166  1.0000000000000001e-39  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0255  extracellular solute-binding protein family 1  30.66 
 
 
439 aa  164  3e-39  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1846  ABC-type sugar transport system, periplasmic component  29.35 
 
 
442 aa  158  2e-37  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00000328949  hitchhiker  0.000299807 
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  29.88 
 
 
439 aa  155  9e-37  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  26.28 
 
 
437 aa  152  8.999999999999999e-36  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_013946  Mrub_0791  extracellular solute-binding protein family 1  26.33 
 
 
399 aa  152  1e-35  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.418273 
 
 
-
 
NC_014212  Mesil_0475  extracellular solute-binding protein family 1  28.26 
 
 
397 aa  150  3e-35  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  28.78 
 
 
458 aa  150  4e-35  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2730  extracellular solute-binding protein family 1  26.35 
 
 
399 aa  150  5e-35  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  27.31 
 
 
437 aa  149  1.0000000000000001e-34  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.78 
 
 
458 aa  148  2.0000000000000003e-34  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  28.78 
 
 
458 aa  147  3e-34  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.78 
 
 
458 aa  147  4.0000000000000006e-34  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.78 
 
 
458 aa  147  4.0000000000000006e-34  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  28.78 
 
 
458 aa  147  5e-34  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  28.78 
 
 
458 aa  147  5e-34  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.78 
 
 
458 aa  147  5e-34  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.78 
 
 
458 aa  147  5e-34  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.29 
 
 
458 aa  142  9e-33  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2535  extracellular solute-binding protein family 1  27.97 
 
 
418 aa  142  9.999999999999999e-33  Meiothermus ruber DSM 1279  Bacteria  normal  0.105932  normal 
 
 
-
 
NC_014212  Mesil_2057  extracellular solute-binding protein family 1  27.72 
 
 
421 aa  140  3e-32  Meiothermus silvanus DSM 9946  Bacteria  normal  0.112802  normal  0.296802 
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  26.67 
 
 
441 aa  137  3.0000000000000003e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  27.95 
 
 
414 aa  136  5e-31  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0476  extracellular solute-binding protein family 1  24.4 
 
 
401 aa  133  5e-30  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2418  extracellular solute-binding protein family 1  28.61 
 
 
447 aa  132  1.0000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_0061  extracellular solute-binding protein family 1  26.57 
 
 
462 aa  127  4.0000000000000003e-28  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0322  extracellular solute-binding protein family 1  25.98 
 
 
435 aa  126  7e-28  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  31.23 
 
 
444 aa  125  1e-27  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  28.49 
 
 
448 aa  124  2e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  25.44 
 
 
425 aa  124  4e-27  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  26.67 
 
 
440 aa  122  1.9999999999999998e-26  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2659  extracellular solute-binding protein family 1  24.88 
 
 
431 aa  121  1.9999999999999998e-26  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00136924  n/a   
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  25.31 
 
 
461 aa  120  3e-26  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  24.88 
 
 
431 aa  120  6e-26  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3270  extracellular solute-binding protein family 1  26.01 
 
 
435 aa  119  9e-26  Dickeya dadantii Ech703  Bacteria  normal  0.543416  n/a   
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  26.67 
 
 
441 aa  118  1.9999999999999998e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  23.9 
 
 
431 aa  117  6e-25  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_013946  Mrub_2791  extracellular solute-binding protein family 1  25 
 
 
402 aa  116  6e-25  Meiothermus ruber DSM 1279  Bacteria  normal  0.448693  normal 
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  24.32 
 
 
444 aa  116  6.9999999999999995e-25  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
NC_008010  Dgeo_2662  extracellular solute-binding protein  24.76 
 
 
433 aa  116  7.999999999999999e-25  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.377519  n/a   
 
 
-
 
NC_012917  PC1_0631  extracellular solute-binding protein family 1  26.33 
 
 
435 aa  115  1.0000000000000001e-24  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5204  extracellular solute-binding protein family 1  25.86 
 
 
440 aa  115  2.0000000000000002e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.306263 
 
 
-
 
NC_013421  Pecwa_0845  extracellular solute-binding protein family 1  25.91 
 
 
435 aa  114  3e-24  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_0332  extracellular solute-binding protein family 1  24.29 
 
 
468 aa  114  3e-24  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0604  extracellular solute-binding protein  24.22 
 
 
433 aa  113  5e-24  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00010036 
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  25.5 
 
 
452 aa  112  9e-24  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
NC_012791  Vapar_4001  extracellular solute-binding protein family 1  25.3 
 
 
442 aa  112  1.0000000000000001e-23  Variovorax paradoxus S110  Bacteria  normal  0.131149  n/a   
 
 
-
 
NC_007413  Ava_4289  extracellular solute-binding protein  23.5 
 
 
466 aa  111  2.0000000000000002e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3276  extracellular solute-binding protein family 1  23.93 
 
 
420 aa  112  2.0000000000000002e-23  Cyanothece sp. PCC 7425  Bacteria  normal  0.147153  normal  0.336546 
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  24.88 
 
 
431 aa  110  4.0000000000000004e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_012669  Bcav_1508  extracellular solute-binding protein family 1  25.54 
 
 
451 aa  110  5e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.55774  normal 
 
 
-
 
NC_008044  TM1040_0849  extracellular solute-binding protein  23.8 
 
 
434 aa  110  5e-23  Ruegeria sp. TM1040  Bacteria  normal  0.0177782  normal 
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  24.77 
 
 
439 aa  107  3e-22  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_013521  Sked_18880  carbohydrate-binding protein  24.79 
 
 
460 aa  103  4e-21  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal  0.173455 
 
 
-
 
NC_009457  VC0395_A1155  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  23.67 
 
 
434 aa  103  5e-21  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  23.06 
 
 
431 aa  103  7e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3957  extracellular solute-binding protein family 1  26.35 
 
 
432 aa  102  1e-20  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0690  extracellular solute-binding protein  25.64 
 
 
402 aa  100  5e-20  Thermosipho melanesiensis BI429  Bacteria  normal  0.678935  n/a   
 
 
-
 
NC_013739  Cwoe_4883  extracellular solute-binding protein family 1  24.87 
 
 
436 aa  99.8  8e-20  Conexibacter woesei DSM 14684  Bacteria  normal  0.504344  normal 
 
 
-
 
NC_011083  SeHA_C3869  glycerol-3-phosphate transporter periplasmic binding protein  24.01 
 
 
438 aa  99  1e-19  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2173  extracellular solute-binding protein family 1  27.32 
 
 
445 aa  99.4  1e-19  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00822083  n/a   
 
 
-
 
NC_011149  SeAg_B3759  glycerol-3-phosphate transporter periplasmic binding protein  24.01 
 
 
438 aa  99  1e-19  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  24.01 
 
 
438 aa  99  1e-19  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3928  glycerol-3-phosphate transporter periplasmic binding protein  24.01 
 
 
438 aa  98.6  2e-19  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1881  extracellular solute-binding protein family 1  27.57 
 
 
445 aa  98.6  2e-19  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000340671  n/a   
 
 
-
 
NC_009523  RoseRS_3149  extracellular solute-binding protein  22.01 
 
 
427 aa  98.6  2e-19  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3119  extracellular solute-binding protein family 1  23.52 
 
 
451 aa  97.8  3e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0770  extracellular solute-binding protein family 1  25 
 
 
444 aa  97.4  4e-19  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0374  glycerol-3-phosphate transporter periplasmic binding protein  23.38 
 
 
444 aa  97.1  6e-19  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A3748  glycerol-3-phosphate transporter periplasmic binding protein  23.78 
 
 
438 aa  96.3  9e-19  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A3492  glycerol-3-phosphate transporter periplasmic binding protein  23.65 
 
 
444 aa  95.5  1e-18  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  21.91 
 
 
407 aa  95.9  1e-18  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_011988  Avi_5507  ABC transporter substrate binding protein (glycerol 3-phosphate)  25.51 
 
 
447 aa  95.9  1e-18  Agrobacterium vitis S4  Bacteria  normal  0.0724145  n/a   
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  22.84 
 
 
410 aa  95.5  2e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_009784  VIBHAR_06396  ABC-type sugar transport system periplasmic protein  25.35 
 
 
435 aa  95.1  2e-18  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008060  Bcen_2712  glycerol-3-phosphate transporter periplasmic binding protein  23.15 
 
 
443 aa  95.1  2e-18  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.290307  n/a   
 
 
-
 
NC_008542  Bcen2424_0395  glycerol-3-phosphate transporter periplasmic binding protein  23.15 
 
 
443 aa  95.1  2e-18  Burkholderia cenocepacia HI2424  Bacteria  normal  0.954301  n/a   
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  22.84 
 
 
410 aa  95.5  2e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2055  extracellular solute-binding protein  24.3 
 
 
436 aa  94.7  3e-18  Cupriavidus metallidurans CH34  Bacteria  normal  0.822621  normal 
 
 
-
 
NC_010003  Pmob_0954  extracellular solute-binding protein  22.2 
 
 
399 aa  94.4  3e-18  Petrotoga mobilis SJ95  Bacteria  normal  0.0450213  n/a   
 
 
-
 
NC_010622  Bphy_2709  glycerol-3-phosphate transporter periplasmic binding protein  23.75 
 
 
441 aa  94  4e-18  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008783  BARBAKC583_0349  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  22.52 
 
 
441 aa  94.4  4e-18  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_2485  extracellular solute-binding protein  26.49 
 
 
415 aa  94  4e-18  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00421769  n/a   
 
 
-
 
NC_012850  Rleg_3391  extracellular solute-binding protein family 1  24.11 
 
 
451 aa  94  5e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.297931 
 
 
-
 
NC_007802  Jann_2075  extracellular solute-binding protein  23.11 
 
 
433 aa  93.6  5e-18  Jannaschia sp. CCS1  Bacteria  normal  0.114781  normal  0.235936 
 
 
-
 
NC_009767  Rcas_0113  extracellular solute-binding protein  25.07 
 
 
455 aa  93.2  7e-18  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.270734  normal 
 
 
-
 
NC_011899  Hore_00780  extracellular solute-binding protein family 1  24.94 
 
 
411 aa  93.6  7e-18  Halothermothrix orenii H 168  Bacteria  normal  0.0480859  n/a   
 
 
-
 
NC_007963  Csal_2738  extracellular solute-binding protein  23.08 
 
 
438 aa  93.2  8e-18  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.345118  n/a   
 
 
-
 
NC_012669  Bcav_0894  extracellular solute-binding protein family 1  24.58 
 
 
470 aa  92.4  1e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.444762  normal  0.144357 
 
 
-
 
NC_008528  OEOE_1459  ABC-type sugar transport system, periplasmic component  22.6 
 
 
457 aa  92.4  1e-17  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>