More than 300 homologs were found in PanDaTox collection
for query gene Tpet_0322 on replicon NC_009486
Organism: Thermotoga petrophila RKU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010483  TRQ2_0340  extracellular solute-binding protein  97.14 
 
 
419 aa  826    Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0322  extracellular solute-binding protein  100 
 
 
419 aa  860    Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0270  extracellular solute-binding protein  76.61 
 
 
419 aa  681    Thermosipho melanesiensis BI429  Bacteria  normal  0.562219  n/a   
 
 
-
 
NC_009718  Fnod_0188  extracellular solute-binding protein  69.93 
 
 
420 aa  627  1e-179  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1068  extracellular solute-binding protein  44.6 
 
 
429 aa  369  1e-101  Petrotoga mobilis SJ95  Bacteria  normal  0.501776  n/a   
 
 
-
 
NC_013205  Aaci_2049  extracellular solute-binding protein family 1  31.91 
 
 
438 aa  196  9e-49  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.266449  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  31.19 
 
 
445 aa  177  2e-43  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1638  ABC-type sugar transport system, periplasmic component  29.59 
 
 
434 aa  174  1.9999999999999998e-42  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.0000325816  normal 
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  31.14 
 
 
436 aa  174  2.9999999999999996e-42  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_013171  Apre_0255  extracellular solute-binding protein family 1  30.37 
 
 
439 aa  165  1.0000000000000001e-39  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  29.1 
 
 
437 aa  162  1e-38  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  28.12 
 
 
437 aa  159  9e-38  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  29.64 
 
 
439 aa  155  1e-36  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008530  LGAS_1846  ABC-type sugar transport system, periplasmic component  28.8 
 
 
442 aa  155  2e-36  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00000328949  hitchhiker  0.000299807 
 
 
-
 
NC_013946  Mrub_0791  extracellular solute-binding protein family 1  26.33 
 
 
399 aa  150  3e-35  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.418273 
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  26.28 
 
 
437 aa  151  3e-35  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_014212  Mesil_0475  extracellular solute-binding protein family 1  28.26 
 
 
397 aa  149  1.0000000000000001e-34  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  27.31 
 
 
437 aa  149  1.0000000000000001e-34  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  28.29 
 
 
458 aa  147  3e-34  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2730  extracellular solute-binding protein family 1  25 
 
 
399 aa  146  7.0000000000000006e-34  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.29 
 
 
458 aa  145  2e-33  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2535  extracellular solute-binding protein family 1  28.88 
 
 
418 aa  145  2e-33  Meiothermus ruber DSM 1279  Bacteria  normal  0.105932  normal 
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  28.29 
 
 
458 aa  144  3e-33  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2057  extracellular solute-binding protein family 1  29.88 
 
 
421 aa  144  3e-33  Meiothermus silvanus DSM 9946  Bacteria  normal  0.112802  normal  0.296802 
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  28.29 
 
 
458 aa  143  4e-33  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.29 
 
 
458 aa  144  4e-33  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  28.29 
 
 
458 aa  143  4e-33  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.29 
 
 
458 aa  144  4e-33  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.29 
 
 
458 aa  143  5e-33  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.29 
 
 
458 aa  143  5e-33  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.8 
 
 
458 aa  139  8.999999999999999e-32  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  27.16 
 
 
441 aa  139  1e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  28.46 
 
 
414 aa  138  2e-31  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2418  extracellular solute-binding protein family 1  28.88 
 
 
447 aa  133  5e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0476  extracellular solute-binding protein family 1  24.46 
 
 
401 aa  132  9e-30  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  31.51 
 
 
444 aa  129  1.0000000000000001e-28  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_013171  Apre_0061  extracellular solute-binding protein family 1  25.24 
 
 
462 aa  127  4.0000000000000003e-28  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0322  extracellular solute-binding protein family 1  25.98 
 
 
435 aa  125  2e-27  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  29.05 
 
 
448 aa  123  5e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  27.22 
 
 
440 aa  122  8e-27  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2659  extracellular solute-binding protein family 1  25.36 
 
 
431 aa  122  9e-27  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00136924  n/a   
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  25.44 
 
 
425 aa  122  1.9999999999999998e-26  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  25.36 
 
 
431 aa  121  1.9999999999999998e-26  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  25.55 
 
 
431 aa  121  1.9999999999999998e-26  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  25.06 
 
 
461 aa  120  3.9999999999999996e-26  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_012880  Dd703_3270  extracellular solute-binding protein family 1  25.78 
 
 
435 aa  119  9e-26  Dickeya dadantii Ech703  Bacteria  normal  0.543416  n/a   
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  26.17 
 
 
441 aa  117  3e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  26.08 
 
 
431 aa  117  5e-25  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_008010  Dgeo_2662  extracellular solute-binding protein  24.94 
 
 
433 aa  115  1.0000000000000001e-24  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.377519  n/a   
 
 
-
 
NC_013946  Mrub_2791  extracellular solute-binding protein family 1  24.49 
 
 
402 aa  114  3e-24  Meiothermus ruber DSM 1279  Bacteria  normal  0.448693  normal 
 
 
-
 
NC_012848  Rleg_5204  extracellular solute-binding protein family 1  26.38 
 
 
440 aa  114  3e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.306263 
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  24.57 
 
 
444 aa  114  4.0000000000000004e-24  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  25.5 
 
 
452 aa  113  6e-24  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
NC_012917  PC1_0631  extracellular solute-binding protein family 1  26.52 
 
 
435 aa  113  7.000000000000001e-24  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_0332  extracellular solute-binding protein family 1  24.29 
 
 
468 aa  112  1.0000000000000001e-23  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_013421  Pecwa_0845  extracellular solute-binding protein family 1  26.1 
 
 
435 aa  111  2.0000000000000002e-23  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3276  extracellular solute-binding protein family 1  23.68 
 
 
420 aa  111  3e-23  Cyanothece sp. PCC 7425  Bacteria  normal  0.147153  normal  0.336546 
 
 
-
 
NC_007413  Ava_4289  extracellular solute-binding protein  23 
 
 
466 aa  110  7.000000000000001e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1508  extracellular solute-binding protein family 1  27.37 
 
 
451 aa  109  8.000000000000001e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.55774  normal 
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  24.24 
 
 
431 aa  108  1e-22  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4001  extracellular solute-binding protein family 1  24.82 
 
 
442 aa  108  1e-22  Variovorax paradoxus S110  Bacteria  normal  0.131149  n/a   
 
 
-
 
NC_008044  TM1040_0849  extracellular solute-binding protein  23.56 
 
 
434 aa  108  2e-22  Ruegeria sp. TM1040  Bacteria  normal  0.0177782  normal 
 
 
-
 
NC_009654  Mmwyl1_0604  extracellular solute-binding protein  24.39 
 
 
433 aa  108  2e-22  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00010036 
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  25 
 
 
439 aa  107  5e-22  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_013521  Sked_18880  carbohydrate-binding protein  24.79 
 
 
460 aa  104  3e-21  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal  0.173455 
 
 
-
 
NC_013739  Cwoe_3957  extracellular solute-binding protein family 1  26.85 
 
 
432 aa  102  1e-20  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_0256  glycerol-3-phosphate transporter periplasmic binding protein  24.43 
 
 
439 aa  102  1e-20  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3962  glycerol-3-phosphate transporter periplasmic binding protein  24.43 
 
 
439 aa  102  1e-20  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0690  extracellular solute-binding protein  26.27 
 
 
402 aa  102  1e-20  Thermosipho melanesiensis BI429  Bacteria  normal  0.678935  n/a   
 
 
-
 
NC_013739  Cwoe_4883  extracellular solute-binding protein family 1  25.38 
 
 
436 aa  100  4e-20  Conexibacter woesei DSM 14684  Bacteria  normal  0.504344  normal 
 
 
-
 
NC_010159  YpAngola_A3655  glycerol-3-phosphate transporter periplasmic binding protein  24.21 
 
 
439 aa  100  7e-20  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3928  glycerol-3-phosphate transporter periplasmic binding protein  24.58 
 
 
438 aa  99  1e-19  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3869  glycerol-3-phosphate transporter periplasmic binding protein  24.58 
 
 
438 aa  99.4  1e-19  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3119  extracellular solute-binding protein family 1  23.99 
 
 
451 aa  99  1e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  24.58 
 
 
438 aa  99.4  1e-19  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3759  glycerol-3-phosphate transporter periplasmic binding protein  24.58 
 
 
438 aa  99.4  1e-19  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2173  extracellular solute-binding protein family 1  27.07 
 
 
445 aa  98.6  2e-19  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00822083  n/a   
 
 
-
 
NC_009457  VC0395_A1155  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  23.71 
 
 
434 aa  97.8  3e-19  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0770  extracellular solute-binding protein family 1  24.52 
 
 
444 aa  97.4  4e-19  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1881  extracellular solute-binding protein family 1  27.32 
 
 
445 aa  97.4  4e-19  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000340671  n/a   
 
 
-
 
NC_009436  Ent638_3856  glycerol-3-phosphate transporter periplasmic binding protein  23.13 
 
 
440 aa  97.4  4e-19  Enterobacter sp. 638  Bacteria  normal  normal  0.64819 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  22.14 
 
 
407 aa  97.1  5e-19  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_009784  VIBHAR_06396  ABC-type sugar transport system periplasmic protein  25.46 
 
 
435 aa  97.1  5e-19  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008783  BARBAKC583_0349  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  24.12 
 
 
441 aa  97.4  5e-19  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3391  extracellular solute-binding protein family 1  24.59 
 
 
451 aa  96.3  8e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.297931 
 
 
-
 
NC_011094  SeSA_A3748  glycerol-3-phosphate transporter periplasmic binding protein  24.28 
 
 
438 aa  96.3  9e-19  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  23.32 
 
 
410 aa  96.3  1e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  23.32 
 
 
410 aa  96.3  1e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2712  glycerol-3-phosphate transporter periplasmic binding protein  23.64 
 
 
443 aa  95.1  2e-18  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.290307  n/a   
 
 
-
 
NC_008542  Bcen2424_0395  glycerol-3-phosphate transporter periplasmic binding protein  23.64 
 
 
443 aa  95.1  2e-18  Burkholderia cenocepacia HI2424  Bacteria  normal  0.954301  n/a   
 
 
-
 
NC_010508  Bcenmc03_0374  glycerol-3-phosphate transporter periplasmic binding protein  23.38 
 
 
444 aa  95.5  2e-18  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3149  extracellular solute-binding protein  21.51 
 
 
427 aa  95.1  2e-18  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0954  extracellular solute-binding protein  22.44 
 
 
399 aa  94.7  3e-18  Petrotoga mobilis SJ95  Bacteria  normal  0.0450213  n/a   
 
 
-
 
NC_007802  Jann_2075  extracellular solute-binding protein  23.11 
 
 
433 aa  94.4  3e-18  Jannaschia sp. CCS1  Bacteria  normal  0.114781  normal  0.235936 
 
 
-
 
NC_009667  Oant_2485  extracellular solute-binding protein  26.04 
 
 
415 aa  93.6  6e-18  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00421769  n/a   
 
 
-
 
NC_007510  Bcep18194_A3492  glycerol-3-phosphate transporter periplasmic binding protein  23.42 
 
 
444 aa  93.2  8e-18  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2055  extracellular solute-binding protein  24.3 
 
 
436 aa  93.2  8e-18  Cupriavidus metallidurans CH34  Bacteria  normal  0.822621  normal 
 
 
-
 
NC_011988  Avi_5507  ABC transporter substrate binding protein (glycerol 3-phosphate)  25.73 
 
 
447 aa  93.2  8e-18  Agrobacterium vitis S4  Bacteria  normal  0.0724145  n/a   
 
 
-
 
NC_009767  Rcas_0113  extracellular solute-binding protein  25.34 
 
 
455 aa  92.4  1e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.270734  normal 
 
 
-
 
NC_009664  Krad_0297  extracellular solute-binding protein family 1  26.16 
 
 
453 aa  92.4  1e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0248346 
 
 
-
 
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