Gene Tmel_0690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0690 
Symbol 
ID5297232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp729546 
End bp730754 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content37% 
IMG OID640768970 
Productextracellular solute-binding protein 
Protein accessionYP_001305939 
Protein GI150020585 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.678935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAT TTTTAGTGAT TTTTTTAGCT TTGATTGTCA TATTTAGTTT TGCAAAAACC 
AAACTCACAT TTTGGGGATT TATGATGAAC GATGAACACG CAAAAAAGGT GTTAGAAAAG
TTCATGGCAG AAAACCCTGA TATTGAAGTA GAGTACGTAC AACTTTCTTG GTCAAACGGT
TTTGACAAAA TAGTAACAGC AATAGCAGGT GGAGAAGATT TAGACGTTGT TGAACTAGGA
AATACTTGGG TTGCAAACTT TGCTGAAAGA AAAGCACTTG AAAACATGGA TAATTTCTAC
AAAACATATG GAAACAACTA TGTAGGTTGG GATACAGTAT ACTATGAGGG TAGTTATTGG
GCAGTTCCTT GGTTACTTGG AACAAGGGCA CTATTCTACA ATCTAGATCT TTTTGACAAG
GCTGGGTTAG ATCCAGAAAA TCCACCAAAA ACTTGGGAAG AACTTTACAA TGCTGCAAAA
GATATAGATT CACTTGGAGA AGATATATAC GGCTTTGGTA TGCCCGCAGG TGAAAATTAC
AGTCCTTGGC AACAATGGTT CTTACCCGCT GTTTGGGGAA CAGGCGGAGA TATTATCTCA
GAAGATGGAA AAAGAGCACT TCTTACCTCA TGCAAGGTAA ATGAAACGGC AAAGTTCTAT
AAAGCACTTT CAAAGTACTC TCTTAAAACC AAACAAGCAG ATCTTGCAAA AGCATTTGGA
GAAGGGAAAA TTGGTATGTA TGTAAGTGGA GCATGGGATA TTGATTATCT TGAAACAAAT
TATCCAGAAT TACCATTTAA CGTCGTATTT ATCCCCAAAC CTGCATCATG GTATGGAACA
CACGCATCTT TTGCCGGCGC AGAAGTACTC GCTATTATGA AACACTCAAA ACATAAAAAA
GAGGCACAAA AACTAGTAGA GTTTCTGATA AAACCTGACA TTGCTATGGA AGTTGCGATG
ATTTGGCCAG CAATATTCCC ATCTCACGTT GATGCGGGAA AAGATCCTTG GTTTGAAGAT
CATCCAATGC ACAAAGTATT TTATGAACAA AATGCATATG CAAAACCTGT TCCGCCTATT
CCTGCGTGGC CAAAAGTGCA GGCAGTACTA ACAGAAGCTA TAGAAAAAAT AATATTGGAA
GATGCAGACG TTGATTCTGT GTTATTCGAA TACAACATGA AAATTCAAAA GATATTAGAT
GGTGAATAA
 
Protein sequence
MRKFLVIFLA LIVIFSFAKT KLTFWGFMMN DEHAKKVLEK FMAENPDIEV EYVQLSWSNG 
FDKIVTAIAG GEDLDVVELG NTWVANFAER KALENMDNFY KTYGNNYVGW DTVYYEGSYW
AVPWLLGTRA LFYNLDLFDK AGLDPENPPK TWEELYNAAK DIDSLGEDIY GFGMPAGENY
SPWQQWFLPA VWGTGGDIIS EDGKRALLTS CKVNETAKFY KALSKYSLKT KQADLAKAFG
EGKIGMYVSG AWDIDYLETN YPELPFNVVF IPKPASWYGT HASFAGAEVL AIMKHSKHKK
EAQKLVEFLI KPDIAMEVAM IWPAIFPSHV DAGKDPWFED HPMHKVFYEQ NAYAKPVPPI
PAWPKVQAVL TEAIEKIILE DADVDSVLFE YNMKIQKILD GE