| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0322 |
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| Symbol | |
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| ID | 5171102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 302914 |
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| End bp | 304173 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640562825 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001243927 |
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| Protein GI | 148269467 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGAAAT TTCTCGTTGT TTTCATGGTG ATTCTCAGTG TTTTTGCCCT CGCGAAGGTG
AAAGTCACGT TCTGGCACGC CATGGGCGGG GGACACGGCA AAACTCTCCA AGAGATAGTG
AACACCTTCA ACGAACTTCA CCCGGATATC GAGGTCGAAG CGGTCTACGT TGGAAACTAC
GGTGCACTCT CTCAGAAGCT CCTCGCAGCA GCGCAGGCAG GAGAACTTCC CACGATCGCA
CAGTCTTATT CCAACTGGAC GGCAAAACTC ATCCAGAGCG GTGTCGTGCA GCCTCTGAAC
GAGTTCGTGA ACGATCCGAA GATAGGGCTG ACCAGGGAAG AGTGGGAAGA TGTCTTCAAA
CCTCTGAGAG ACAACTGTAT GTGGGGAGAC ACCGTCTACG CGGTTCCGTT CAACAAGAGT
CTCTACATAC TCTACTACAA CGCGGACGCC TTTGCAATGT ACGGTGTGGA TGTGCCCAAA
ACGATCGATG AACTCTACGA AGCCGCGAGA ATCATGACGG AAGATCTTGA CGGAGATGGG
AAGATCGACC AGTACGGTTT TGGCTTCAGG ACGACCGTTG ACTTCTTCCA GATACTCCTC
ATCCTCCGCG GTGGTTCCAT CCTGAAACAG GTCGACGGCA AATGGGTTTC CAACATCGAC
AGCCAGGAAA CAAGAGAGGT CCTTGCCTTC GTGAAGAAGA TGGTGGACGA TGGTATCGCG
TACTTCCAAG GTGGATACCT CAACGATATC TTCGGTCAGC AGAAGATCAT GATGTACATC
GACACAATAG CGGGAAGGCC CTACGTGGAA AGCTCCACAA AGGGGAAGTT CACCTGGAGC
TGGGCTCCAG TTCCCACCTG GGTGACGAAC AAGGTGCCGT TCGCCGGAAC AGACATCATC
ATGTTCAACA CGGCAAGCGA TGAGGAAAAA CGTGCCGCCT GGGAGTTCAT GAAGTACCTC
ATCTCTCCTG AGGTGACTGC TTACTGGGCG ATCAACACGG GTTACATTCC TGTGAGAAGA
AGCGCCCTCG AAACGTCGAT CTGGAAGGAA GCGGCTAAAT CCGATCCTCT GATCGAAATA
CCTCTGAAGC AGATAGACAA CGCCGTGTTC GATCCACAGA TCGGTGTATG GTACGAGATC
AGAACGGTGG TTGGAAACAT GTTCTCCGAT TTCATCAACG GAAAGGTAGA CATGGAAACT
GCGATAAAGA CGGCGGATCA GAAGATAAGG GAGTATCTCA AGGAAGAGTA CGGCGAGTGA
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| Protein sequence | MKKFLVVFMV ILSVFALAKV KVTFWHAMGG GHGKTLQEIV NTFNELHPDI EVEAVYVGNY
GALSQKLLAA AQAGELPTIA QSYSNWTAKL IQSGVVQPLN EFVNDPKIGL TREEWEDVFK
PLRDNCMWGD TVYAVPFNKS LYILYYNADA FAMYGVDVPK TIDELYEAAR IMTEDLDGDG
KIDQYGFGFR TTVDFFQILL ILRGGSILKQ VDGKWVSNID SQETREVLAF VKKMVDDGIA
YFQGGYLNDI FGQQKIMMYI DTIAGRPYVE SSTKGKFTWS WAPVPTWVTN KVPFAGTDII
MFNTASDEEK RAAWEFMKYL ISPEVTAYWA INTGYIPVRR SALETSIWKE AAKSDPLIEI
PLKQIDNAVF DPQIGVWYEI RTVVGNMFSD FINGKVDMET AIKTADQKIR EYLKEEYGE
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