| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0270 |
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| Symbol | |
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| ID | 5297990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 277715 |
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| End bp | 278974 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640768529 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001305529 |
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| Protein GI | 150020175 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.562219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC TTTTGGTTAT TATTTTAGCA TTATTAGTTG TCTTTTCTTT TGCAAAAACT
AAAGTTATAT TTTGGCATGC GATGGGTGGA AATCATGGGA AGACTTTGGA GCAAATTGTT
AAATCATTTA ATGATTCACA TCCAGATATC GAAGTTGAAG CTATATACGT AGGAAATTAT
GGTGCATTAA GTCAAAAGCT CCTTGCAGGT GCACAAGCAG GAGAGCTTCC AACAATATCC
CAAGCTTATT CAAACTGGAC AGCAAAACTT ATTCAGAGTA GAGTGGTTCA AAAATTAAAC
GATTTCCTAT TTGATCCAGA AATTGGATTG ACAAAGGAAG AATGGGAAGA TGTTTATGAG
CCATTAAGGA AAAATTGTAT GTGGGGTAAT GATGTTTATG CAGTACCATT TAACAAAAGT
TTATATGTCC TTTATTACAA TGCAGATCTT TTAACTCTTT ATGGTGTAGA TGTTCCAAAA
TCAATTAACG AATTGTATTA TGCAGCGAAA GTTTTAACAG AAGATGTTGA TGGTGATGGT
AAACCAGATC AATATGGTTT TGGTTTTAGA ACGACTGTTG ATTTGTTCCA AATCTTACTT
TCTTTAAGAG GCGGTTCTAT CTTGAAAAAT GTTGATGGTA AATGGGTATC AAACATTGAT
AGCCCAGAAA CAAGGGATGT TTTAAGATTT GTTAGAAAGC TTATAGATGA TGGCGTTGCA
TATTATCAAG GTGGGTATAT GAATGATCCA TTTGGACAAC AAAAAGTAGT TATGTATATT
GGTACAATTG CAGGTAGAAA ATATGTTGAA GGATCAGTAA AGGGAAAATT CAATTGGAGC
TGGGCTCCTG TACCTGTTTG GAAGACGAGA AATGTACCAT TTGCAGGAAC AGATGTAATT
ATGTTTGCAA ATGCAACGGA AGAACAAAAG AAAGCAGCAT GGGAATTTAT GAAGTATCTT
ATTTCACCAG ATGTAACAGC TTTTTGGTCT GTAAATACTG GATATATTCC GGTAAGAAAA
AGTGCTCTTG AAACAAATAT TTGGAAAGAA AATGTAAAAT CCGATCCACT TGCGGAAGTA
CCATTAACGC AAATAGAAAA TGCAGTATTT GACCCACAAA TAGGAGTATG GTATGAAATT
AGAACAGTAG TAAGTAATAT GTTCTCTGAT TTTGTAAATG GTAAAGTGGA TATGGGAACT
GCAATTAAAA CTGCAGACGA TCAAATTAAG AAATATCTTG CAGAAGAATA TGGAGAATAA
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| Protein sequence | MKKLLVIILA LLVVFSFAKT KVIFWHAMGG NHGKTLEQIV KSFNDSHPDI EVEAIYVGNY
GALSQKLLAG AQAGELPTIS QAYSNWTAKL IQSRVVQKLN DFLFDPEIGL TKEEWEDVYE
PLRKNCMWGN DVYAVPFNKS LYVLYYNADL LTLYGVDVPK SINELYYAAK VLTEDVDGDG
KPDQYGFGFR TTVDLFQILL SLRGGSILKN VDGKWVSNID SPETRDVLRF VRKLIDDGVA
YYQGGYMNDP FGQQKVVMYI GTIAGRKYVE GSVKGKFNWS WAPVPVWKTR NVPFAGTDVI
MFANATEEQK KAAWEFMKYL ISPDVTAFWS VNTGYIPVRK SALETNIWKE NVKSDPLAEV
PLTQIENAVF DPQIGVWYEI RTVVSNMFSD FVNGKVDMGT AIKTADDQIK KYLAEEYGE
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