Gene Bcav_3775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3775 
Symbol 
ID7860514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4188818 
End bp4190197 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content67% 
IMG OID643867878 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002883779 
Protein GI229822253 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.137854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGAGGA GCACCGCACG TCCCCCCACG GGGTTTCGCA CCATCCGTCG CGCTCTCAGC 
GCCACCACCG CCGTCGGTCT CTTGGCCGGG CTCGCCGCAT GTGCTTCCGC GGGGAGCTCC
GAGGAGCAGG AGGGCGACGG CACCCTTGCC GGCGACGTCC TCATGTGGAC GAGCTTCACC
CAGGGCCCGC GCGCCGAGTA CATGGAGGAC ATGGCCGCGC GCTTCGAGGA GGAAAACCCT
GGCGTCTCGA TCACCATCGA GACGTTCGCC TGGCCGGAGT TCTACACGAA GTGGACCACC
GGCCTCGCCT CCGGCCAGGT GCCCGACCTC TCGAGCGCGC TGCCCACCCA CGTGGTGGAG
ATGATCGGGG CCGAGGCGCT CGTCCCCGTC GACGACGTCA TCGACTCGAT CGGCCGCGAC
CGGTTCTCCG AGGCGGCTCT CGCGGAGGGG CAGGTCGATG GCGTCAGCTA CTCCGTCCCG
ATTTACACCC ACGCGCAGGT CATGTGGTAC CGCAAGGACC TGCTCGCGGC CGCCGGGCTC
GAGGTGCCGC AGACCTGGGA CGAGTTGCGC CAGGCTGCAG AGGTCCTCAC GAGCGACGAC
GTGTACGGGC TGTCCGTGCC GCTCGGCTCC AACGACATGA TGGCCACGCG GTTCCTCAAC
TACTACGTGC AGTCCAACGG CGAGACGCTG CTCAACGAGG ACGGCACCGC GAACCTCACG
TCGCAGGCCG CGCTGGACGG CATCGAGTAT TGGGTCGACA TGTACGAGAC GACCTCCCCC
GAGGGCTCGA TCAACTACGC GGTGCTCGAC CAGGCGACGC TGTACTACCA GGGCAAGACG
GCGTTCGACT TCAACTCCGG GTTCCAGATC TCCGGCGTCG CCGATACGTC GCCGGACCTG
CTTGACCAGA TCGCTGCTGC CCCGCTGCCG CGCATGGACG CCGATGACCC GATCTATGGC
GGCGAGACGT CCAACACGCC GATGGTCGTC TGGCAAGCGA GCGACGTGCA GGAAGAGGCG
AAGGCGTTCC TCGAGTTCCT GTACCAGGAC TCCGATTACA TCGACTTCAT CCACTCCGTG
CCGGGTGGCA TGCTCCCGGC GCTGTCGGAC ATCTCGGAGG ACCCGGCGTA CCTCGACGAG
CCCACGCTCC AGCAGTTCGC CGACACGGTC GACGTCATTG AGGAGGCCGT CCCGCTCGGG
ACGGCGATCG GCATGGAGGA GGGCCCGCGG ATCCAGGCAG GCATCCTTAC CAGCCAGGGT
GTCATCGAGG GGATGTTCCA GTCGATCATC CTCAATGACG AGCCAGTCGA GGATGCGGCA
ATCGCGGCCC AGGAGCAGCT GGACAGCCTC TTCGCCTCGG CCGGCGCCGA GCTGGGCTGA
 
Protein sequence
MSRSTARPPT GFRTIRRALS ATTAVGLLAG LAACASAGSS EEQEGDGTLA GDVLMWTSFT 
QGPRAEYMED MAARFEEENP GVSITIETFA WPEFYTKWTT GLASGQVPDL SSALPTHVVE
MIGAEALVPV DDVIDSIGRD RFSEAALAEG QVDGVSYSVP IYTHAQVMWY RKDLLAAAGL
EVPQTWDELR QAAEVLTSDD VYGLSVPLGS NDMMATRFLN YYVQSNGETL LNEDGTANLT
SQAALDGIEY WVDMYETTSP EGSINYAVLD QATLYYQGKT AFDFNSGFQI SGVADTSPDL
LDQIAAAPLP RMDADDPIYG GETSNTPMVV WQASDVQEEA KAFLEFLYQD SDYIDFIHSV
PGGMLPALSD ISEDPAYLDE PTLQQFADTV DVIEEAVPLG TAIGMEEGPR IQAGILTSQG
VIEGMFQSII LNDEPVEDAA IAAQEQLDSL FASAGAELG