| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2252 |
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| Symbol | |
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| ID | 3905020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2629297 |
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| End bp | 2630706 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637879583 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_481349 |
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| Protein GI | 86740949 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00844632 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0063434 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACAGCCG TTTCCCGGCA CGACGATGCT GCTGGACATG AACGGGACGC AGGACAAGAA
CGGGACGCAG GACAGGAACG CCCGGGCCGC CGTCCGCGGC GGCACCGGGC CCGGCTGGTC
GTCACGGCGT TGTCCGCCGC GGTCGGCCTG CTCGCCGTGG CGGCCTGCGG CTCGGACAGC
GACACCGCCT CCGGTACCCC GGCCGCGACA CCGCAAGGTG ACACCCCGGC GACCATCACC
TTCCTGTCCT ACAACTACGG CACCCCGGGT CTCGGTGGTA CGGGAACCCA GGCACTGCTC
GACGCCTTCG CCAAGGCGCA CCCGAAGATC ACGGTCAAGC CGCAGGGCGT CGCGGTGAAG
GACGTCCTCA CCCGGCTGCG CACCGACACC GCCGCCGGTG ATCCGCCCGA CGTCGCCCAG
ATCGGCTGGA GCAAGATGGC CGAGGCGGTC GACGCCCTGC CTATCACCCC GGTCCAGAAG
GTCGCCGGCA GCGAGTGGGA GTCGGCCACC GCCGGCATCT CGAAGAGCAT CCTGTCGGCC
GTCTCCACCA ACGGCGTCGT CGCGGCGATG CCGTTCACGA TGTCGATCCC GGTCATGTAC
TACAACGCCG ACCTGTTCCG CGCCGCCGGC CTGGACCCGC AACACCCGCC GACGACCCTC
GCCGACGTCA AGGCCGCCGC TTTGAAGATC AAGGCGACCG GTAAGCAGGG CGTCTACATC
AGCGTCGTCG ACAGCGGGAA GTCGGACTAC CTGACCCAGT CGGTCGTCAA CTCCAACGGC
GGCTCGCTGG TGGACAAGAA CGGCGGCGTC ACCCTCGACA AGCAGCCGGC CGTCGAGGCG
CTGGCCACGA TCGCCGACCT GACCGCCTCG GGTGCCCAGC CCGGAGTCAA GGCCGAAGCG
GCCCTGGCCG CGTTCACCAA GGGTGACCTC GGCATGTTCG TCACCAGCAC GGCGCTGCTC
GCCAGCGCCC AGAAGGCGGC GGCGGGCAAG TTCGAGCTGC GCACCGCGGG TCTGCCGTCC
TTCGGCACCA AACCCGCCCG CCCGACCTAC TCCGGCGCCG GGCTCGCGGT GCTGGCCAAG
GACCCGGCCA AGCAGCGCGC CGCCTGGGAG TTCATCAAGT TCCTCACCTC CGACGAGGGC
TTCGAGATCA TCACCTCGAA GATCGGTTAC CTGCCGCTGC GACAGAGCGT GGCGACGAAG
CTCGCCGGCA CCCCGATCGT GAAGCTGCTG GAACCGGCCC TCGACCAGCT CGACACCGTC
ACCCCCTACA CCTCGTTCCG CGGGGCGAAG GCCAACCAGG CCGTCGTCGT GCTGCAGGAC
GAGGCCGTCG AACCGATCGT CCTGCGCGGG GCCGATCCCC AGGCGACCCT GAGCAAGGCC
GCCGAGAAGA TCCGCGCACT CTCCTCCTGA
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| Protein sequence | MTAVSRHDDA AGHERDAGQE RDAGQERPGR RPRRHRARLV VTALSAAVGL LAVAACGSDS
DTASGTPAAT PQGDTPATIT FLSYNYGTPG LGGTGTQALL DAFAKAHPKI TVKPQGVAVK
DVLTRLRTDT AAGDPPDVAQ IGWSKMAEAV DALPITPVQK VAGSEWESAT AGISKSILSA
VSTNGVVAAM PFTMSIPVMY YNADLFRAAG LDPQHPPTTL ADVKAAALKI KATGKQGVYI
SVVDSGKSDY LTQSVVNSNG GSLVDKNGGV TLDKQPAVEA LATIADLTAS GAQPGVKAEA
ALAAFTKGDL GMFVTSTALL ASAQKAAAGK FELRTAGLPS FGTKPARPTY SGAGLAVLAK
DPAKQRAAWE FIKFLTSDEG FEIITSKIGY LPLRQSVATK LAGTPIVKLL EPALDQLDTV
TPYTSFRGAK ANQAVVVLQD EAVEPIVLRG ADPQATLSKA AEKIRALSS
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