| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4566 |
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| Symbol | |
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| ID | 5211552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5723744 |
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| End bp | 5725105 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640598145 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001278847 |
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| Protein GI | 148658642 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGA TCAACCGACG ACAATTCCTG CGCGGTGTGG CGGCTGGCGC CGGTGCGCTG
ACGCTGGCAG CCTGCGGCGG CGGCACGACG ACCGAACCCA CAGCGGCGCC AGCGCAACCC
ACAGCGGCGC CACCCACTGC AATGCCCCAG GGCGCAATGG GTTCAACGGT CGAAATCACC
TACTGGGGGT CATTCAGCGG CGTACTCGGT GAGGCGGAGC AGGCGACTGT CGAAGCCTTC
AACAGCATGC AGCAGGATGT CAAAGTCAAC TACCAGTTCC AGGGCAACTA CGAAGAGACG
GCGCAGAAGT TGACCGCTGC GGTTCAGGCG CGCCAGACGC CGGACGTCAG CCTGCTCTCG
GATGTCTGGT GGTTCTCGTT CTATATCAAC GGTCAGTTGC AGCCGCTCGA CGATCTGATG
GCAGCCGAAG GCGTCAAGCG CGAAGCCTAC GTGGATGTGC TGCTCAACGA AGGCATCCGC
AAGAATACCG TCTACTGGAT CCCGTTCGCA CGCTCGACGC CGCTGTTCTA CTACAACAAG
GATGCCTGGG CGGAGGCAGG GCTTGAGGAT CGTGCGCCGA AGACCTGGGA CGAATTCATG
GAGTGGGCGC CGAAACTCAA CAAAGAGGGA CGCGCCGCAT TTGCCCACCC CGGCGCTGCA
AGTTACATCG CCTGGCTCTT CCAGGGTGTG ATCTGGCAGT TTGGCGGACG CTACAGCGAC
CCCGACTTCA CCATCCGCAT CCACGAAGAG GGCGGCATCA AAGCTGGCAA CTTCTACCGT
GACACGACCC AGACCTACAA GTGGGCAACC ACGCCGAAGG ACGTGACCCA GGACTTCGTC
ACCGGTCAGT CAGCCAGCGC GATGTTGAGC ACTGCTGCGC TGGCAGGCGT CGAGAAGAAT
GCGCAGTTCC CGGTCGGCAC CGGCTTTCTG CCGGAAGGAC CGGCTGGCTT CGGGTGCTGC
ACCGGCGGCG CGGGTATGGC CATCCTGGCG GGCCTGCCTG CTGAGAAGCA GCAGGCGGCG
ATGAAGTGGA TCGCCTTTGC CACCGGTGAG GAGTGGACAA TTAACTGGGC GCAGCGCACA
GGATATATGC CGGTGCGCAA GGCAGCGGTG CAGTCGGAGA GTATGCAGAA ATATTTTACC
GAGCGCCCCA ACTTCCGCAC GGCGGTCGAA CAGTTGCCGA AGACCCGTCC GCAGGACTCG
GCGCGCGTCT ATGTACGCGG CGGCGATCAG ATCATCGGCA AGGGGTTGGA GCGCATTACG
GTTGCGGGCG AAGACCCGGC GAAGGTCTGG ATGGACGTCA AGAAAGAACT CGAAGAGGCT
GCCGCGCCAA CCGTCGAACT GTTGAAGACG GTTGAGGGTT AG
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| Protein sequence | MATINRRQFL RGVAAGAGAL TLAACGGGTT TEPTAAPAQP TAAPPTAMPQ GAMGSTVEIT
YWGSFSGVLG EAEQATVEAF NSMQQDVKVN YQFQGNYEET AQKLTAAVQA RQTPDVSLLS
DVWWFSFYIN GQLQPLDDLM AAEGVKREAY VDVLLNEGIR KNTVYWIPFA RSTPLFYYNK
DAWAEAGLED RAPKTWDEFM EWAPKLNKEG RAAFAHPGAA SYIAWLFQGV IWQFGGRYSD
PDFTIRIHEE GGIKAGNFYR DTTQTYKWAT TPKDVTQDFV TGQSASAMLS TAALAGVEKN
AQFPVGTGFL PEGPAGFGCC TGGAGMAILA GLPAEKQQAA MKWIAFATGE EWTINWAQRT
GYMPVRKAAV QSESMQKYFT ERPNFRTAVE QLPKTRPQDS ARVYVRGGDQ IIGKGLERIT
VAGEDPAKVW MDVKKELEEA AAPTVELLKT VEG
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