| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1287 |
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| Symbol | |
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| ID | 3962160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1379613 |
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| End bp | 1380920 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637916102 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_522552 |
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| Protein GI | 89900081 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTGA AACTTGCTGC TGTCGCTCTG GCAGCGTCGT GTGCCCTTTC GGCCCAGGCT
GTGACCGAGG TCCAGTGGTG GCACTCGATG ACTGCGGTGA ACGGCGAATG GGTCAACGAC
CTGGCCAAAG GTTTTAACGC CAGCCAGAGC AACTACAAAA TTGTGCCCAC CTACAAAGGC
ACTTACGACG AATCCATGAC ATCGGCCGTG GCAGCGTTCC GCGCCGGCAA TGCGCCGCAC
ATTTTGCAGG TGTTTGAAGT GGGCACCGCC ACCATGATGG CGAGCAAGAA CGCCATCGTG
CCAGTCGGCA AGATCATGAA GGATGCGGGG CAGAAGTTTG ACCCCAAAGC CTATATCTCG
GCCGTGGCCG GTTACTACAC CGCACCCAGC GGCGAGATGC TGAGCTTTCC CTTCAACAGC
TCCACCACGG TCTTCTATTA CAACAAGGAT GCCTTCAAAG CCGCCGGGCT GGATCCTGAA
AAAGCCCCCA GCAGTTGGCC CGAAGTGGCG CTGGCCGCCG CCAAGCTCAA GGCCAACGGC
CACAAGTGCC CACTGACGGT GGCCTGGCAA GGCTGGACCC AGTTGGAGAG TTTTTCCGCC
TGGCACAACG TTGAATTTGC CACCAAGGCC AACGGTCTGG CCGGCATGGA TGCCCGCATG
AAGGTCAACT CGGATCTGCA TGTGCGTCAC ATTGGCAACC TGGCCAACAT GGCCAAGCAG
GGCCTGTTTG TCTACAAAGG CCGCGCCAAC GTGCCCGAAG CCACCTTTGT CTCGGGCGAG
TGCGCCATGA TCACCACCTC CAGCGGCTTT TACGGCAATG TGAAGAAAAA CGCCAAGTTT
GCCTATGGCC TGGCCCCCTT GCCCTACTAC CCGGATGTGC CCGGCGCACC GCAAAACACC
GTCATTGGCG GTGCCAGTTT GTGGGTCATG GCGGGCAAGA AAGCCGATGA ATACAAGGGC
GTGGCCGAGT TCTTTACCTA TGTCTCAAGC CCCGAAGTGC AGTCCGCCAG CCACAAGCGC
ACCGGCTACC TGCCCATCAC CACCGCAGCA TTTCAGTTGA CTGAAAAATC CGGTTTCTAC
AAGGAAAATC CGGGCACCGA TGTGGCGGTC AATCAGATGA TCCGCAAGGT GACAGACAAG
TCGCGCGGCA TCCGCCTGGG CAACTATGTG CAGATCCGCA CCATCGAGGA CGAAGAACTG
GAACAGGTCT GGGGCGGCAA GAAATCGGCC AAAGAGGCCT TGGACGCCAT TGTCAAGCGC
GGCAATGAGC TGCTGGAGCG GTTTGAGAAA GCCAACAAAA ATGGCTAA
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| Protein sequence | MKLKLAAVAL AASCALSAQA VTEVQWWHSM TAVNGEWVND LAKGFNASQS NYKIVPTYKG
TYDESMTSAV AAFRAGNAPH ILQVFEVGTA TMMASKNAIV PVGKIMKDAG QKFDPKAYIS
AVAGYYTAPS GEMLSFPFNS STTVFYYNKD AFKAAGLDPE KAPSSWPEVA LAAAKLKANG
HKCPLTVAWQ GWTQLESFSA WHNVEFATKA NGLAGMDARM KVNSDLHVRH IGNLANMAKQ
GLFVYKGRAN VPEATFVSGE CAMITTSSGF YGNVKKNAKF AYGLAPLPYY PDVPGAPQNT
VIGGASLWVM AGKKADEYKG VAEFFTYVSS PEVQSASHKR TGYLPITTAA FQLTEKSGFY
KENPGTDVAV NQMIRKVTDK SRGIRLGNYV QIRTIEDEEL EQVWGGKKSA KEALDAIVKR
GNELLERFEK ANKNG
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