More than 300 homologs were found in PanDaTox collection
for query gene Dd1591_4133 on replicon NC_012912
Organism: Dickeya zeae Ech1591



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012912  Dd1591_4133  extracellular solute-binding protein family 1  100 
 
 
426 aa  875    Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2799  extracellular solute-binding protein  48.48 
 
 
453 aa  386  1e-106  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.357786  n/a   
 
 
-
 
NC_009952  Dshi_2014  sn-glycerol-3-phosphate-binding periplasmic protein ugpB precursor  25.69 
 
 
433 aa  111  2.0000000000000002e-23  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.167012  hitchhiker  0.0071297 
 
 
-
 
NC_009718  Fnod_0188  extracellular solute-binding protein  27.27 
 
 
420 aa  109  1e-22  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  26.2 
 
 
448 aa  108  2e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  26.7 
 
 
441 aa  105  1e-21  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  25.65 
 
 
431 aa  100  4e-20  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_014212  Mesil_0476  extracellular solute-binding protein family 1  28.21 
 
 
401 aa  98.6  2e-19  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  22.82 
 
 
437 aa  97.4  4e-19  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  22.76 
 
 
437 aa  96.3  9e-19  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_009784  VIBHAR_06396  ABC-type sugar transport system periplasmic protein  26.06 
 
 
435 aa  95.9  1e-18  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008783  BARBAKC583_0349  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  24.47 
 
 
441 aa  95.5  2e-18  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  23.38 
 
 
458 aa  94  4e-18  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  24.94 
 
 
437 aa  94.4  4e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  23.38 
 
 
458 aa  93.2  7e-18  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2659  extracellular solute-binding protein family 1  24.46 
 
 
431 aa  93.2  8e-18  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00136924  n/a   
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  23.15 
 
 
458 aa  92.8  1e-17  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  23.15 
 
 
458 aa  91.7  2e-17  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  23.15 
 
 
458 aa  92  2e-17  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  23.15 
 
 
458 aa  92  2e-17  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  24.46 
 
 
431 aa  91.7  2e-17  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  23.15 
 
 
458 aa  92  2e-17  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  22.92 
 
 
458 aa  90.9  4e-17  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  22.92 
 
 
458 aa  90.9  4e-17  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  26.97 
 
 
452 aa  90.9  4e-17  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
NC_009616  Tmel_0270  extracellular solute-binding protein  28.18 
 
 
419 aa  90.5  5e-17  Thermosipho melanesiensis BI429  Bacteria  normal  0.562219  n/a   
 
 
-
 
NC_013946  Mrub_0322  extracellular solute-binding protein family 1  25.72 
 
 
435 aa  89.7  8e-17  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  22.69 
 
 
458 aa  89  1e-16  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_30840  ABC-type sugar transport system, periplasmic component  24.08 
 
 
463 aa  88.2  2e-16  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  26.65 
 
 
440 aa  87.8  3e-16  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  23.49 
 
 
445 aa  87.4  4e-16  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2093  glycerol-3-phosphate ABC transporter extracellular solute-binding family 1 protein  23.78 
 
 
435 aa  87.4  4e-16  Psychromonas ingrahamii 37  Bacteria  normal  0.107678  normal  0.487826 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  26.04 
 
 
407 aa  87  6e-16  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_009486  Tpet_0322  extracellular solute-binding protein  24.87 
 
 
419 aa  86.3  0.000000000000001  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  25.19 
 
 
441 aa  85.1  0.000000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2075  extracellular solute-binding protein  24.04 
 
 
433 aa  84.7  0.000000000000003  Jannaschia sp. CCS1  Bacteria  normal  0.114781  normal  0.235936 
 
 
-
 
NC_013421  Pecwa_0117  glycerol-3-phosphate transporter periplasmic binding protein  25.49 
 
 
444 aa  83.2  0.000000000000008  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0340  extracellular solute-binding protein  23.99 
 
 
419 aa  83.2  0.000000000000009  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3270  extracellular solute-binding protein family 1  25.75 
 
 
435 aa  82.4  0.00000000000001  Dickeya dadantii Ech703  Bacteria  normal  0.543416  n/a   
 
 
-
 
NC_008528  OEOE_1459  ABC-type sugar transport system, periplasmic component  21.82 
 
 
457 aa  82.8  0.00000000000001  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  23.41 
 
 
431 aa  82.4  0.00000000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1155  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  26.24 
 
 
434 aa  82.8  0.00000000000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0604  extracellular solute-binding protein  24.21 
 
 
433 aa  82.8  0.00000000000001  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00010036 
 
 
-
 
NC_007778  RPB_4664  extracellular solute-binding protein  25.39 
 
 
448 aa  82  0.00000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.593429 
 
 
-
 
NC_009485  BBta_0714  ABC transporter substrate-binding protein  23.84 
 
 
429 aa  81.6  0.00000000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1265  extracellular solute-binding protein family 1  23.3 
 
 
446 aa  80.9  0.00000000000004  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  23.27 
 
 
431 aa  80.1  0.00000000000006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_011004  Rpal_5274  extracellular solute-binding protein family 1  24.38 
 
 
442 aa  79.3  0.0000000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1264  glycerol-3-phosphate-binding periplasmic lipoprotein signal peptide  24.43 
 
 
438 aa  78.6  0.0000000000002  Ralstonia solanacearum GMI1000  Bacteria  normal  0.400828  normal  0.517414 
 
 
-
 
NC_007964  Nham_3686  extracellular solute-binding protein  24.25 
 
 
460 aa  78.6  0.0000000000002  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5204  extracellular solute-binding protein family 1  21.58 
 
 
440 aa  77.8  0.0000000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.306263 
 
 
-
 
NC_007347  Reut_A2052  extracellular solute-binding protein  26.22 
 
 
438 aa  77.8  0.0000000000004  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2738  extracellular solute-binding protein  23.08 
 
 
438 aa  77.8  0.0000000000004  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.345118  n/a   
 
 
-
 
NC_013946  Mrub_0791  extracellular solute-binding protein family 1  24.41 
 
 
399 aa  77  0.0000000000007  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.418273 
 
 
-
 
NC_013171  Apre_0061  extracellular solute-binding protein family 1  23.14 
 
 
462 aa  76.6  0.0000000000008  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2730  extracellular solute-binding protein family 1  24.34 
 
 
399 aa  76.6  0.0000000000008  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  25.27 
 
 
444 aa  76.3  0.0000000000009  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2055  extracellular solute-binding protein  24.31 
 
 
436 aa  76.3  0.000000000001  Cupriavidus metallidurans CH34  Bacteria  normal  0.822621  normal 
 
 
-
 
NC_012791  Vapar_4134  extracellular solute-binding protein family 1  24.54 
 
 
437 aa  76.3  0.000000000001  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0862  extracellular solute-binding protein  23.83 
 
 
437 aa  75.5  0.000000000002  Acidovorax sp. JS42  Bacteria  normal  normal  0.597127 
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  25.42 
 
 
444 aa  74.7  0.000000000003  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_011992  Dtpsy_0791  extracellular solute-binding protein family 1  23.83 
 
 
437 aa  74.7  0.000000000003  Acidovorax ebreus TPSY  Bacteria  normal  0.721808  n/a   
 
 
-
 
NC_007958  RPD_4373  extracellular solute-binding protein  23.76 
 
 
437 aa  74.7  0.000000000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.104197  normal 
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  23.06 
 
 
425 aa  74.3  0.000000000003  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_012917  PC1_0631  extracellular solute-binding protein family 1  25.06 
 
 
435 aa  74.3  0.000000000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  20.23 
 
 
436 aa  73.9  0.000000000005  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_009921  Franean1_3944  extracellular solute-binding protein  25.82 
 
 
464 aa  73.6  0.000000000006  Frankia sp. EAN1pec  Bacteria  normal  0.920276  normal  0.0416082 
 
 
-
 
NC_009565  TBFG_12848  sn-glycerol-3-phosphate-binding lipoprotein ugpB  24.53 
 
 
436 aa  73.6  0.000000000007  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000142723  normal 
 
 
-
 
NC_007948  Bpro_0857  extracellular solute-binding protein  24.54 
 
 
437 aa  73.2  0.000000000008  Polaromonas sp. JS666  Bacteria  normal  normal  0.221606 
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  23.67 
 
 
414 aa  72.8  0.00000000001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_4022  extracellular solute-binding protein  22.2 
 
 
431 aa  72.4  0.00000000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3290  ABC glycerol-3-phosphate transporter, periplasmic binding protein, UgpB  22.2 
 
 
431 aa  72  0.00000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3285  hypothetical protein  22.47 
 
 
431 aa  71.6  0.00000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.339711  normal 
 
 
-
 
NC_010003  Pmob_1068  extracellular solute-binding protein  24.75 
 
 
429 aa  71.2  0.00000000003  Petrotoga mobilis SJ95  Bacteria  normal  0.501776  n/a   
 
 
-
 
NC_012669  Bcav_3988  extracellular solute-binding protein family 1  24.35 
 
 
422 aa  71.2  0.00000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0354  ABC transporter substrate binding protein (sn-glycerol 3-phosphate)  24.87 
 
 
432 aa  70.9  0.00000000004  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3861  glycerol-3-phosphate transporter periplasmic binding protein  23.91 
 
 
439 aa  70.9  0.00000000005  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0097  extracellular solute-binding protein  24.15 
 
 
434 aa  70.9  0.00000000005  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3650  extracellular solute-binding protein  22.9 
 
 
436 aa  70.5  0.00000000005  Acidovorax citrulli AAC00-1  Bacteria  normal  0.144474  normal 
 
 
-
 
NC_012669  Bcav_1508  extracellular solute-binding protein family 1  25.14 
 
 
451 aa  70.5  0.00000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.55774  normal 
 
 
-
 
NC_009708  YpsIP31758_0256  glycerol-3-phosphate transporter periplasmic binding protein  25.13 
 
 
439 aa  70.1  0.00000000006  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3962  glycerol-3-phosphate transporter periplasmic binding protein  25.13 
 
 
439 aa  70.1  0.00000000006  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3655  glycerol-3-phosphate transporter periplasmic binding protein  24.61 
 
 
439 aa  70.5  0.00000000006  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0845  extracellular solute-binding protein family 1  24.56 
 
 
435 aa  70.1  0.00000000007  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2049  extracellular solute-binding protein family 1  24.42 
 
 
438 aa  69.7  0.00000000009  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.266449  n/a   
 
 
-
 
NC_010511  M446_1646  extracellular solute-binding protein  22.87 
 
 
440 aa  69.7  0.0000000001  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.143266 
 
 
-
 
NC_013521  Sked_18880  carbohydrate-binding protein  25.17 
 
 
460 aa  69.7  0.0000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal  0.173455 
 
 
-
 
NC_009436  Ent638_3856  glycerol-3-phosphate transporter periplasmic binding protein  25.06 
 
 
440 aa  68.9  0.0000000001  Enterobacter sp. 638  Bacteria  normal  normal  0.64819 
 
 
-
 
NC_012791  Vapar_4001  extracellular solute-binding protein family 1  23.23 
 
 
442 aa  68.6  0.0000000002  Variovorax paradoxus S110  Bacteria  normal  0.131149  n/a   
 
 
-
 
NC_010658  SbBS512_E3870  glycerol-3-phosphate transporter periplasmic binding protein  24.89 
 
 
438 aa  68.9  0.0000000002  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  21.16 
 
 
437 aa  68.6  0.0000000002  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_3710  extracellular solute-binding protein  23.67 
 
 
431 aa  68.6  0.0000000002  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00279907  normal 
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  25.79 
 
 
439 aa  68.9  0.0000000002  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  23.02 
 
 
461 aa  67.8  0.0000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_009767  Rcas_0113  extracellular solute-binding protein  23.5 
 
 
455 aa  67.4  0.0000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.270734  normal 
 
 
-
 
NC_009523  RoseRS_4566  extracellular solute-binding protein  23.75 
 
 
453 aa  67.8  0.0000000004  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_4045  glycerol-3-phosphate transporter periplasmic binding protein  24.25 
 
 
439 aa  67  0.0000000007  Dickeya zeae Ech1591  Bacteria  normal  0.661181  n/a   
 
 
-
 
NC_014212  Mesil_0475  extracellular solute-binding protein family 1  23.5 
 
 
397 aa  66.6  0.0000000009  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5465  extracellular solute-binding protein  24.6 
 
 
434 aa  66.6  0.0000000009  Delftia acidovorans SPH-1  Bacteria  normal  0.355429  normal 
 
 
-
 
NC_008542  Bcen2424_0395  glycerol-3-phosphate transporter periplasmic binding protein  24.03 
 
 
443 aa  66.2  0.000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  0.954301  n/a   
 
 
-
 
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