Gene M446_1646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1646 
Symbol 
ID6128917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1840088 
End bp1841410 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content68% 
IMG OID641641904 
Productextracellular solute-binding protein 
Protein accessionYP_001768573 
Protein GI170739918 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.143266 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGA ACACGATCCT TCGCGCCGGA CTCGCGGTCC TCGGGATCGC GGCGGCCGGT 
CCCGCCCTCG CGGTCACCGA ACTGCAATGG TGGCACGCCA TGGTGGGGGC CAACAACGAC
GCGGTCATTC GGCTGGCCGA GGAGTTCAAC GCCTCGCAGA GCGAGTACAA GGTGGTCCCG
GCCTACAAGG GTACCTATCC GGAGACGCTG AACGCCGGCA TCGCGGCCTT CCGGGCCGGC
ACCGCGCCGC ACATCATCCA GGTCTTCGAG GTCGGCACCG CCACCATGAT GGCGGCCAAG
GGTGCGGTGA AGCCCGTCTA CCAGCTGATG AAGGAGGCGG GCGAGCCCTT CGACCCGAAT
GCCTACCTGC CGGCCATCAC GGGTTACTAC TCCACCGCCG CCGGGGAGAT GCTGTCCTTC
CCGTTCAATT CCTCGTCGAT GGTGATGTGG GTCAACCGGG ACGCGCTGAA GAAGGCCGGC
CTCGACCCGA ACGCGCCGCC CAAGACCTGG CCCGAGGTCT TCGCCGCCGC CAAGGCCCTC
AAGGCTGCCG GCTACACCAC CTGCGGCGTC TCCAACACCT GGGTGACCTG GGCCCACCTG
GAGCAGTTCT CGGCCTGGCA CAACGTGCCG CTCGCCACCA AGGCCAACGG GCTCGACGGC
TTCGACACCG CCCTGCAGAT CAACGGGCCG CTGCAGGTCA AGCACCTCGC GACGCTCGCG
GAGATGCAGA AGGACAAGCT CTACGACTAT TCCGGCCGCT ACGACAACGG CTTCGGGCGC
TTCACCTCGG GCGAGTGCCC GCTGATGCTC GGCTCCTCCG GCTCCTACGG CAACGTGCGC
GGCAACGCCA AGTTCGAGTG GGCGGCGGCC CCGATGCCCT ATTATCCCGA CGCGCCCGGC
GCGCCGCAGA ACAGCATCAT CGGCGGCGCC TCGCTCTGGG TGATGGGCGG CAAGTCGGCC
GAGGAGTACA AGGGCGTCGC CAAGTTCTTC GCCTTCCTGT CGGACACCGA GCGGCAGGCG
CGCATCCACC AGACCACCGG CTACCTGCCG ATCACCAAGG CGGCCTACGA GAAGTCGAAG
GCGGATGGCT GGTACGACAA GAACCCGGCC CTCGAAGTCC CGCTCAAGGA ACTGACCAAC
AAGCCGCCGA CCGGGAATTC CCGCGGCCTG CGCCTCGGCA ACATGCCGCA GATGCGCGAC
GTCTGGGCCG AGGAGATCGA GGCGGCGCTC GCCGGCAAGA AGAGCGCCAA GGAGGCCCTC
GACGAGGCCG CCGCCCGCGG CAACGCCATG CTGCGCCAGT TCGAGAAGCA AGCGAACCGC
TGA
 
Protein sequence
MALNTILRAG LAVLGIAAAG PALAVTELQW WHAMVGANND AVIRLAEEFN ASQSEYKVVP 
AYKGTYPETL NAGIAAFRAG TAPHIIQVFE VGTATMMAAK GAVKPVYQLM KEAGEPFDPN
AYLPAITGYY STAAGEMLSF PFNSSSMVMW VNRDALKKAG LDPNAPPKTW PEVFAAAKAL
KAAGYTTCGV SNTWVTWAHL EQFSAWHNVP LATKANGLDG FDTALQINGP LQVKHLATLA
EMQKDKLYDY SGRYDNGFGR FTSGECPLML GSSGSYGNVR GNAKFEWAAA PMPYYPDAPG
APQNSIIGGA SLWVMGGKSA EEYKGVAKFF AFLSDTERQA RIHQTTGYLP ITKAAYEKSK
ADGWYDKNPA LEVPLKELTN KPPTGNSRGL RLGNMPQMRD VWAEEIEAAL AGKKSAKEAL
DEAAARGNAM LRQFEKQANR