| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3285 |
|---|
| Symbol | |
|---|
| ID | 5085776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | - |
|---|
| Start bp | 155925 |
|---|
| End bp | 157220 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640484857 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001169474 |
|---|
| Protein GI | 146279316 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.339711 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAC GCGCATTCCT TACCGCCACG GCTCTTGCCC TCGTGGCGCA GGCGGGCGTT
GCCGCCGCCC AGACCGACAT CAGCTGGTGG CACGCCATGA CGGGCGCCAA TGCGGAAGTG
GTCGAGAAGA TTGCCTCGGA CTTCAACGCC AGCCAGTCTG ACTACCGGGT GACGCCGGTC
TTCAAGGGCA CCTACCCCGA GACGCTGAAC GCGGGCATCG CCGCCTTTCG CGCGGGTCAG
GCCCCGGACA TCATCCAGGT CTTCGACGTG GGCACCGGCG TCATGATGGC GGCCGAAGGA
GCGATCATGC CGGTGGCCGA GTTGCTCGGC GACAGCTTCG ACAAGTCGGC CTACCTGCCG
GGCATCGTGG CCTATTACTC CAGGCCCGAC GGCACGATGC TGTCCTTCCC CTACAACTCC
TCCTCGCCGA TCCTCTATTA CAACAAGGAC ATCTTCGAGA AGGCCGGCCT CGACACCGAC
ACGCCGCCCA AGACCTGGGC CGAGGTCTGG GACATGTCCC GCAAGATCAA GGAGAGCGGC
GCCGCGCCTT GCGGCTATAC CTCGACCTGG CTCACATGGA TCCATCTCGA GAATTTCGCC
GCCTGGAACG ACGTGGCCTA TGCCACGAAC GAGAACGGGC TTGCCGACGT CAACGCCGAG
CTGAAGATCA ACGAACCGAT CTTCGTGAAC CACTTCCAGG CACTCGCCGA TCTGGCCAGC
GACGGAACCT TCCGCTACGG CGGCCGCACC TCCGAGGCCA AGCAGATCTT CCTCGCCGGC
GAATGCGGGA TTTTCACTGA AAGCTCAGGC GGTTTGGGCG ATATCGTGAA GTCCGGCATG
AACTACGGAA TCGGGCAGTT GCCCTACGAC GAGGCGGGCA ACGGACCGCA GAACACCGTT
CCGGGCGGCG CAAGCCTCTG GGTGATGGGC GGCAAGTCGG ACGAGACCTA CGAGGGTGTC
GCCGCCTTCT TCCGCTATCT CTCGCAGACC GACGTTCAGG AATATCTGCA CCAGACCTCG
GGCTATCTGC CCGTGACGCT GGAGGCCTAC GAGTCGACCA AGGCCTCGGG CTTCTACGAT
GAGAACCCCG GGCGCGAAGT GCCGATCACC CAGATGATGG GCAAGGAGCC GACCGAAAAC
TCCAAGGGCG TGCGGCTGGT GAACCTGCCG CAGGTGCGCG ACATCGAGAA CGAGGAGTTC
GAGAAGATGC TCGCGGGTCA GCAGACCGCG CAGCAAGCGC TGGATGCTGC GACCCAGCGC
GGCAACGAGG CGATCCGTCA GGCCGTCGGC GGCTGA
|
|---|
| Protein sequence | MKRRAFLTAT ALALVAQAGV AAAQTDISWW HAMTGANAEV VEKIASDFNA SQSDYRVTPV
FKGTYPETLN AGIAAFRAGQ APDIIQVFDV GTGVMMAAEG AIMPVAELLG DSFDKSAYLP
GIVAYYSRPD GTMLSFPYNS SSPILYYNKD IFEKAGLDTD TPPKTWAEVW DMSRKIKESG
AAPCGYTSTW LTWIHLENFA AWNDVAYATN ENGLADVNAE LKINEPIFVN HFQALADLAS
DGTFRYGGRT SEAKQIFLAG ECGIFTESSG GLGDIVKSGM NYGIGQLPYD EAGNGPQNTV
PGGASLWVMG GKSDETYEGV AAFFRYLSQT DVQEYLHQTS GYLPVTLEAY ESTKASGFYD
ENPGREVPIT QMMGKEPTEN SKGVRLVNLP QVRDIENEEF EKMLAGQQTA QQALDAATQR
GNEAIRQAVG G
|
|---|
| |