| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4373 |
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| Symbol | |
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| ID | 4024898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4836584 |
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| End bp | 4837897 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637964583 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_571491 |
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| Protein GI | 91978832 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.104197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGGA CCCCGCTGAT ATTCGCCCTT GTGTTGCTAG TCGTCGCCGG CGCAGCGCCC
GCGCGGGCCG CGACGGAGAT CGCGTGGTGG CACGCGATGT CCGGAGAACT CGGCCGCCGT
CTCGAAAAGC TCGCAGCCGA TTTCAATGCG TCGCAATCCG ACTACCGTGT GGTGCCGACC
TACAAAGGCA ACTACACCGA GACGGTCACC GCGTCGATCT TCGCGTTCCG CTCGTCGACT
CAGCCGGCGA TCGTTCAGGT CAACGAGATC GCCACCGCAA CAATGATGGC CGCCAAGGGC
GCGGTTTATC CGGTCTACGA GCTGATGCGC GACGAGAAGG AGGCGTTCTC GCCGTCCGAC
TATCTGCCCG CGGTCGCCGG CTACTATGTC GATCTCGCCG GCAATATGCT GTCGTTTCCG
TTCAACGCCT CGACGCCGAT TCTGTACTAC AACAAGACGC TGTTCAAAAA GGCGGGGCTC
GATCCGGAGA CGCCGCCGGG CACTTGGCCG GACGTCGGCG CCGCGGCGAA GCGGCTGATC
GACGCGGGCG TGCCCTGCGG ATTCACCACC TCCTGGCCCT CCTGGGTCAA TGTCGAGAAT
TTCTCCGCCT ATCACAATCT TCCGCTCGCG ACTCGGGCCA ACGGCCTCGG CGGGCTGGAC
GCGGTGCTGG TGTTCAACAA TCCGCTGGTG ATCAGGCACG TCGCCACGCT CGCGGAATGG
CAGAAAACCA AGGTGTTCGA CTATGCCGGC CGCGCCACCG CCGCAGAGCC GCGCTTTCAG
CAGGGCGACT GCGGCATCTT CATCGGCTCG TCCGCCACCC GTGCCGATAT CATCGCCAAT
TCCAATTTCG AGGTCGGCTA CGGCAGGCTG CCGTATTGGC CGGAGGTTCC CGGGGCGCCG
CAGAATACGA TCATCGGCGG GGCGACGCTG TGGGTGCTGC GCGGCCGGCC GGCGACGGAC
TATCACGGCG TCGCCAAGTT CTTCACCTAT CTGTCGCGGC CCGAAGTGCA GGCCGCCTGG
CACCAGAACA CGGGCTATCT TCCGGTGACA CGGGCCGCCT ATCAGCTGAC CCGTGCGCAG
GGCTTTTACG ACCGCAATCC GGGCACCGCG ATCTCGATCG AGCAGATCAT CTCGAAGCCG
CCCACCGAAA ACTCCCGCGG GCTCCGGCTC GGTTCTTTCG TTCTGATCCG CGACGTCATC
GACGACGAGC TCGAACAGGC ATTCAGGGGC AAGAAACCCG CGCAGGCCGC GATGAATTCC
GCGGTCGAGC GCGGCAACAA GTTGCTGCGC CAGTTCGAAC GGACGCAGCC ATGA
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| Protein sequence | MARTPLIFAL VLLVVAGAAP ARAATEIAWW HAMSGELGRR LEKLAADFNA SQSDYRVVPT
YKGNYTETVT ASIFAFRSST QPAIVQVNEI ATATMMAAKG AVYPVYELMR DEKEAFSPSD
YLPAVAGYYV DLAGNMLSFP FNASTPILYY NKTLFKKAGL DPETPPGTWP DVGAAAKRLI
DAGVPCGFTT SWPSWVNVEN FSAYHNLPLA TRANGLGGLD AVLVFNNPLV IRHVATLAEW
QKTKVFDYAG RATAAEPRFQ QGDCGIFIGS SATRADIIAN SNFEVGYGRL PYWPEVPGAP
QNTIIGGATL WVLRGRPATD YHGVAKFFTY LSRPEVQAAW HQNTGYLPVT RAAYQLTRAQ
GFYDRNPGTA ISIEQIISKP PTENSRGLRL GSFVLIRDVI DDELEQAFRG KKPAQAAMNS
AVERGNKLLR QFERTQP
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