| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3290 |
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| Symbol | ugpB |
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| ID | 3721890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | - |
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| Start bp | 347727 |
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| End bp | 349022 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640072958 |
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| Product | ABC glycerol-3-phosphate transporter, periplasmic binding protein, UgpB |
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| Protein accession | YP_354798 |
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| Protein GI | 77465295 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTC GCACATTCCT CACCGCCACG GCGCTTGCGT TGATCGTGCA GGCGGGTGCC
GCCGCGGCCC AGACCGAGAT CAGCTGGTGG CACGCCATGA CGGGCGCCAA TGCGGAAGTG
GTCGAGAAGA TCGCCGCGGA TTTCAACGCG AGCCAGTCGG ACTACAAGGT GACAGCGGTC
TTCAAGGGCA CCTACCCCGA GACGCTGAAC GCCGGCATCG CAGCCTTCCG CGCCGGTCAG
GCCCCCGACA TCATCCAGGT CTTCGACGTG GGCACCGGCG TCATGATGGC GGCCGAGGGC
GCGATCAAGC CGGTGGCCGA GGTGCTGGGC GACAGCTTCG ACAAATCGGC CTACCTGCCG
GGGATCGTGG CCTATTATTC CAAGCCCGAC GGCACGATGC TGTCCTTCCC CTACAACTCG
TCCTCGCCGA TCCTCTATTA CAACAAGGAC ATCTTCGAGA AGGCGGGCCT CGATGCAGAC
ACCCCGCCCA AGACCTGGAC CGAGGTCTGG GACATGGCGA AGAAGATCAA GGAGAGCGGC
GCCGCCCCCT GCGGCTACAC CTCGACCTGG CTCACCTGGA TCCATACCGA GAATTTCGCG
GCCTGGAACG ACGTGCCCTT CGCCACGAAC GAGAACGGGC TCGCCGATGT GAATGCCGAG
CTGAAGATCA ACGAGCCGAT CTTCGTCAAC CACTTCCAGG CGCTGGCCGA TCTCGCCAAG
GACGGCACGT TCAAATACGG CGGCCGCACG TCCGAGGCCA AACAGATCTT CCTTGCGGGC
GAATGCGGGA TCTTCACCGA AAGCTCGGGC GGGCTCGGCG ACATCGTGAA ATCGGGCATG
AACTACGGCA TCGGCCAGCT GCCCTATGAC GAGGCGGGCA ACGGGCCGCA GAACACGGTG
CCGGGCGGCG CAAGCCTCTG GGTGATGGGC GGCAAGTCGG ACGAGACCTA TGAGGGCGTC
GCCGCCTTCT TCACCTATCT CTCGCAGACC GACGTGCAGG AATATCTGCA CCAGACGTCG
GGCTATCTGC CGGTGACGAT GGAGGCCTAC GAGGCGACCA AGGCCTCGGG CTTCTACGAG
AAGAACCCGG GCCGCGAGGT GCCGATCACC CAGATGATGG GCAAGGAGCC GACCGCCAAC
TCCAAGGGCG TGCGCCTCGT GAACCTGCCG CAGGTGCGCG ACATCGAGAA CGAGGAGTTC
GAGAAGATGC TCGCCGGAGA GCAGACCGCG CAGGAGGCGC TCGACGCCGC CGTCTCGCGC
GGCAACGAGG CGATCCGCCA GGCCATCGGC GGCTGA
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| Protein sequence | MKRRTFLTAT ALALIVQAGA AAAQTEISWW HAMTGANAEV VEKIAADFNA SQSDYKVTAV
FKGTYPETLN AGIAAFRAGQ APDIIQVFDV GTGVMMAAEG AIKPVAEVLG DSFDKSAYLP
GIVAYYSKPD GTMLSFPYNS SSPILYYNKD IFEKAGLDAD TPPKTWTEVW DMAKKIKESG
AAPCGYTSTW LTWIHTENFA AWNDVPFATN ENGLADVNAE LKINEPIFVN HFQALADLAK
DGTFKYGGRT SEAKQIFLAG ECGIFTESSG GLGDIVKSGM NYGIGQLPYD EAGNGPQNTV
PGGASLWVMG GKSDETYEGV AAFFTYLSQT DVQEYLHQTS GYLPVTMEAY EATKASGFYE
KNPGREVPIT QMMGKEPTAN SKGVRLVNLP QVRDIENEEF EKMLAGEQTA QEALDAAVSR
GNEAIRQAIG G
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