272 homologs were found in PanDaTox collection
for query gene Bcav_1527 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_1527  extracellular solute-binding protein family 1  100 
 
 
465 aa  949    Beutenbergia cavernae DSM 12333  Bacteria  normal  0.922727  normal  0.377984 
 
 
-
 
NC_013172  Bfae_30840  ABC-type sugar transport system, periplasmic component  62.65 
 
 
463 aa  535  1e-151  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1508  extracellular solute-binding protein family 1  41.27 
 
 
451 aa  315  9.999999999999999e-85  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.55774  normal 
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  36.92 
 
 
448 aa  280  4e-74  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0297  extracellular solute-binding protein family 1  32.77 
 
 
453 aa  198  1.0000000000000001e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0248346 
 
 
-
 
NC_009767  Rcas_0113  extracellular solute-binding protein  31.27 
 
 
455 aa  188  1e-46  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.270734  normal 
 
 
-
 
NC_009565  TBFG_12848  sn-glycerol-3-phosphate-binding lipoprotein ugpB  31.96 
 
 
436 aa  188  2e-46  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000142723  normal 
 
 
-
 
NC_011831  Cagg_2195  extracellular solute-binding protein family 1  31.49 
 
 
450 aa  186  5e-46  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4566  extracellular solute-binding protein  31.92 
 
 
453 aa  187  5e-46  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2663  extracellular solute-binding protein family 1  32.56 
 
 
468 aa  184  2.0000000000000003e-45  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013521  Sked_18880  carbohydrate-binding protein  30.8 
 
 
460 aa  181  2.9999999999999997e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal  0.173455 
 
 
-
 
NC_014158  Tpau_3527  extracellular solute-binding protein family 1  33.05 
 
 
436 aa  177  2e-43  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2948  extracellular solute-binding protein  31.51 
 
 
448 aa  176  6e-43  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0894  extracellular solute-binding protein family 1  31.09 
 
 
470 aa  168  2e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.444762  normal  0.144357 
 
 
-
 
NC_013172  Bfae_29870  carbohydrate-binding protein  30.28 
 
 
448 aa  167  2e-40  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2244  extracellular solute-binding protein family 1  29.04 
 
 
455 aa  165  2.0000000000000002e-39  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.846858 
 
 
-
 
NC_013171  Apre_0061  extracellular solute-binding protein family 1  27.75 
 
 
462 aa  115  1.0000000000000001e-24  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  26.11 
 
 
458 aa  107  5e-22  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  26.11 
 
 
458 aa  107  5e-22  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  25.94 
 
 
458 aa  106  7e-22  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  25.88 
 
 
458 aa  106  1e-21  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.88 
 
 
458 aa  105  1e-21  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.88 
 
 
458 aa  106  1e-21  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.88 
 
 
458 aa  105  2e-21  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.66 
 
 
458 aa  104  3e-21  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.22 
 
 
458 aa  102  1e-20  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  26.54 
 
 
436 aa  101  2e-20  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  25.82 
 
 
445 aa  101  2e-20  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2846  extracellular solute-binding protein family 1  30.45 
 
 
435 aa  100  5e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.687638 
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.22 
 
 
458 aa  100  6e-20  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3270  extracellular solute-binding protein family 1  24.8 
 
 
435 aa  100  8e-20  Dickeya dadantii Ech703  Bacteria  normal  0.543416  n/a   
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  24.38 
 
 
437 aa  97.8  3e-19  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_007964  Nham_3686  extracellular solute-binding protein  26.15 
 
 
460 aa  97.4  4e-19  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  24.38 
 
 
437 aa  97.1  6e-19  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_009720  Xaut_4449  extracellular solute-binding protein  27.35 
 
 
446 aa  97.1  6e-19  Xanthobacter autotrophicus Py2  Bacteria  decreased coverage  0.00843107  normal  0.115126 
 
 
-
 
NC_013421  Pecwa_0117  glycerol-3-phosphate transporter periplasmic binding protein  25.75 
 
 
444 aa  93.2  1e-17  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2173  extracellular solute-binding protein family 1  26.1 
 
 
445 aa  92  2e-17  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00822083  n/a   
 
 
-
 
NC_012880  Dd703_3861  glycerol-3-phosphate transporter periplasmic binding protein  24.38 
 
 
439 aa  92  2e-17  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  26.4 
 
 
439 aa  92  2e-17  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_010465  YPK_3962  glycerol-3-phosphate transporter periplasmic binding protein  26.46 
 
 
439 aa  91.7  3e-17  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3655  glycerol-3-phosphate transporter periplasmic binding protein  26.46 
 
 
439 aa  91.3  3e-17  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_0256  glycerol-3-phosphate transporter periplasmic binding protein  26.46 
 
 
439 aa  91.7  3e-17  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_3732  glycerol-3-phosphate transporter periplasmic binding protein  24.86 
 
 
438 aa  91.3  3e-17  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_3856  glycerol-3-phosphate transporter periplasmic binding protein  25.14 
 
 
440 aa  90.9  4e-17  Enterobacter sp. 638  Bacteria  normal  normal  0.64819 
 
 
-
 
NC_011992  Dtpsy_2659  extracellular solute-binding protein family 1  28.11 
 
 
431 aa  90.9  5e-17  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00136924  n/a   
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  26.69 
 
 
452 aa  90.5  5e-17  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
CP001509  ECD_03302  glycerol-3-phosphate transporter subunit  24.86 
 
 
438 aa  90.1  7e-17  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0262  extracellular solute-binding protein family 1  24.86 
 
 
438 aa  90.1  7e-17  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4767  glycerol-3-phosphate transporter periplasmic binding protein  24.86 
 
 
438 aa  90.1  7e-17  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.552805 
 
 
-
 
NC_012892  B21_03255  hypothetical protein  24.86 
 
 
438 aa  90.1  7e-17  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3650  glycerol-3-phosphate transporter periplasmic binding protein  24.86 
 
 
438 aa  90.1  7e-17  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2738  extracellular solute-binding protein  25.82 
 
 
438 aa  90.1  7e-17  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.345118  n/a   
 
 
-
 
NC_010468  EcolC_0263  glycerol-3-phosphate transporter periplasmic binding protein  24.86 
 
 
438 aa  90.1  7e-17  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  25.48 
 
 
444 aa  90.1  7e-17  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E3870  glycerol-3-phosphate transporter periplasmic binding protein  24.93 
 
 
438 aa  90.5  7e-17  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4045  glycerol-3-phosphate transporter periplasmic binding protein  24.86 
 
 
439 aa  90.1  8e-17  Dickeya zeae Ech1591  Bacteria  normal  0.661181  n/a   
 
 
-
 
NC_010003  Pmob_1068  extracellular solute-binding protein  24.4 
 
 
429 aa  90.1  8e-17  Petrotoga mobilis SJ95  Bacteria  normal  0.501776  n/a   
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  27.05 
 
 
431 aa  89.4  1e-16  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_009654  Mmwyl1_0604  extracellular solute-binding protein  25.54 
 
 
433 aa  89.4  1e-16  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00010036 
 
 
-
 
NC_011369  Rleg2_2351  extracellular solute-binding protein family 1  26.3 
 
 
435 aa  88.6  2e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0456809  normal  0.0969201 
 
 
-
 
NC_010483  TRQ2_0340  extracellular solute-binding protein  25.2 
 
 
419 aa  88.6  2e-16  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0097  extracellular solute-binding protein  27.6 
 
 
434 aa  89  2e-16  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_3931  glycerol-3-phosphate transporter periplasmic binding protein  24.59 
 
 
438 aa  89  2e-16  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2093  glycerol-3-phosphate ABC transporter extracellular solute-binding family 1 protein  25.67 
 
 
435 aa  88.6  2e-16  Psychromonas ingrahamii 37  Bacteria  normal  0.107678  normal  0.487826 
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  28.11 
 
 
431 aa  88.6  2e-16  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008783  BARBAKC583_0349  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  23.77 
 
 
441 aa  88.6  2e-16  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_2014  sn-glycerol-3-phosphate-binding periplasmic protein ugpB precursor  23.78 
 
 
433 aa  88.2  3e-16  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.167012  hitchhiker  0.0071297 
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  25.61 
 
 
440 aa  88.2  3e-16  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  24.72 
 
 
439 aa  87.8  3e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  24.59 
 
 
441 aa  87.4  5e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3151  extracellular solute-binding protein  24.27 
 
 
426 aa  86.3  0.000000000000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.345086 
 
 
-
 
NC_011004  Rpal_0129  extracellular solute-binding protein family 1  26.14 
 
 
426 aa  85.5  0.000000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.57996  n/a   
 
 
-
 
NC_014212  Mesil_0476  extracellular solute-binding protein family 1  27.2 
 
 
401 aa  85.1  0.000000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_3697  glycerol-3-phosphate transporter periplasmic binding protein  24.86 
 
 
441 aa  85.5  0.000000000000002  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0322  extracellular solute-binding protein  24.93 
 
 
419 aa  85.1  0.000000000000002  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06396  ABC-type sugar transport system periplasmic protein  26.58 
 
 
435 aa  84.7  0.000000000000004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_014212  Mesil_0475  extracellular solute-binding protein family 1  25.63 
 
 
397 aa  84.3  0.000000000000004  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4664  extracellular solute-binding protein  25.4 
 
 
448 aa  84.3  0.000000000000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.593429 
 
 
-
 
NC_009718  Fnod_0188  extracellular solute-binding protein  23.91 
 
 
420 aa  84.3  0.000000000000004  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0322  extracellular solute-binding protein family 1  24.18 
 
 
435 aa  84  0.000000000000005  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1881  extracellular solute-binding protein family 1  25.27 
 
 
445 aa  84.3  0.000000000000005  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000340671  n/a   
 
 
-
 
NC_007958  RPD_4373  extracellular solute-binding protein  25.41 
 
 
437 aa  84  0.000000000000005  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.104197  normal 
 
 
-
 
NC_007778  RPB_0174  extracellular solute-binding protein  24.43 
 
 
426 aa  83.6  0.000000000000006  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.396862  normal 
 
 
-
 
NC_011083  SeHA_C3869  glycerol-3-phosphate transporter periplasmic binding protein  24.1 
 
 
438 aa  84  0.000000000000006  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  24.1 
 
 
438 aa  84  0.000000000000006  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0714  ABC transporter substrate-binding protein  24.59 
 
 
429 aa  83.6  0.000000000000006  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3759  glycerol-3-phosphate transporter periplasmic binding protein  24.1 
 
 
438 aa  84  0.000000000000006  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0791  extracellular solute-binding protein family 1  26.05 
 
 
399 aa  83.2  0.000000000000008  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.418273 
 
 
-
 
NC_011205  SeD_A3928  glycerol-3-phosphate transporter periplasmic binding protein  24.1 
 
 
438 aa  83.2  0.000000000000009  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  27.29 
 
 
441 aa  83.2  0.000000000000009  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2744  glycerol-3-phosphate transporter periplasmic binding protein  24.59 
 
 
441 aa  82.8  0.00000000000001  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3726  glycerol-3-phosphate transporter periplasmic binding protein  24.59 
 
 
441 aa  82.8  0.00000000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  0.268589  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3209  glycerol-3-phosphate transporter periplasmic binding protein  24.59 
 
 
441 aa  82.8  0.00000000000001  Burkholderia mallei SAVP1  Bacteria  normal  0.0248662  n/a   
 
 
-
 
NC_008836  BMA10229_A1760  glycerol-3-phosphate transporter periplasmic binding protein  24.59 
 
 
441 aa  82.8  0.00000000000001  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2794  glycerol-3-phosphate transporter periplasmic binding protein  24.59 
 
 
441 aa  82.8  0.00000000000001  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  22.67 
 
 
437 aa  83.2  0.00000000000001  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5274  extracellular solute-binding protein family 1  25.96 
 
 
442 aa  82.8  0.00000000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3755  glycerol-3-phosphate transporter periplasmic binding protein  24.59 
 
 
441 aa  82.4  0.00000000000002  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0631  extracellular solute-binding protein family 1  25.33 
 
 
435 aa  81.3  0.00000000000003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3748  glycerol-3-phosphate transporter periplasmic binding protein  26.48 
 
 
438 aa  81.3  0.00000000000004  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
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