| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0129 |
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| Symbol | |
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| ID | 6407772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 142414 |
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| End bp | 143694 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642710038 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_001989167 |
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| Protein GI | 192288562 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.57996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAAGA GATGGATCGC CGCAGCCGCG ATGACGCTGG TTGCGGGCAT CGCCCACGCC
CAGCAGCAGA CCGAAGTGGT GCTGCAGTTC CCGTATCCGG AACTGTTCAG CGAGACCCAC
AAGCGGATCG CCGAAGAGTT CGCCAAGGTG CATCCGGAGA TCAAGGTCAC GTTCCGGGCG
CCGTACGAGT CGTACGAAGA GGCCACCCAG AAGGTGCTGC GCGAGGCGGT GACCAATCAG
CTGCCGGACG TCACCTTCCA GGGCCTGAAC CGCATCCGCG TGCTGGTCGA CAAGACCATC
CCGGCGCCGC TCGATGGCTA CATCGCGGCC GAGAAGGATT TCGACAAGCA GGGCTTCCAT
CAGGCGATGT ACGACATCGG CACCGCCAGC GGCAAAGTCT ATGCGCTGCC GTTCGCGATC
TCGCTGCCGA TCGTCTACGT CAATCTCGAT CTGGTGAAAC AGGCCGGCGG CGATGTGAAC
AACCTGCCGA CCACCTGGGA CGGCCTGTTG GATCTGGCCA AGAAGGTCAA GGCGCTCGGC
CCCGACACCA ACGGCATCAC GTATGCCTGG GACATCACTG GCAACTGGCT GTGGCAGGCG
CCGGTGTTCG CACGCGGCGG CACCATGCTC AACGCCGATG AAACCAAGGT GGCGTTCGAC
GGCCCCGAAG GCCAGTTCGC GATGCGCACC ATCGCCCGCC TGGTCACCGA AGGCGGCATG
CCGAATCTCG ACCAGCCGTC GATGCGCGCC ACCTTCGCGG CCGGCAAGAC CGGAATCCAC
ATCACCTCGA CCTCGGACCT GAAGAAGACC ACCGACATGA TCGGCGGCAA GTTCGCGCTG
AAGACCATCG CGTTCCCGGA CGTCGTCAAG CCGAACGGCC GGTTGCCGGC GGGCGGCAAT
GTCGTGCTGA TCACCGCCAA GGACAAAGCC AAGCGCGATG CCGCCTGGGA AGTGGTGAAG
TTCTGGACCG GTCCGAAGGG CGCGGCGATC ATGGCTGAGA CCACCGGCTA CATGCCGCCC
AACAAGGTCG CCAACGACGT CTATCTGAAG GATTTCTACG CCAAGAACCC GAACAACTAC
ACCGCGGTCA GCCAGCTCGC GCTGCTGACC AAGTGGTATG CGTTCCCGGG CGACAACGGC
CTGAAGATCA CCGACGTGAT CAAGGATCAT CTCAACTCGA TCGTCTCCGG CGCCCGCGCC
AAGGAGCCGG ATGCGGTGCT GGCCGACATG ACCCGCGACG TCCAGAACCT GCTGCCGAAG
ACCGTCGGCG CCGCCAAGTA A
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| Protein sequence | MLKRWIAAAA MTLVAGIAHA QQQTEVVLQF PYPELFSETH KRIAEEFAKV HPEIKVTFRA
PYESYEEATQ KVLREAVTNQ LPDVTFQGLN RIRVLVDKTI PAPLDGYIAA EKDFDKQGFH
QAMYDIGTAS GKVYALPFAI SLPIVYVNLD LVKQAGGDVN NLPTTWDGLL DLAKKVKALG
PDTNGITYAW DITGNWLWQA PVFARGGTML NADETKVAFD GPEGQFAMRT IARLVTEGGM
PNLDQPSMRA TFAAGKTGIH ITSTSDLKKT TDMIGGKFAL KTIAFPDVVK PNGRLPAGGN
VVLITAKDKA KRDAAWEVVK FWTGPKGAAI MAETTGYMPP NKVANDVYLK DFYAKNPNNY
TAVSQLALLT KWYAFPGDNG LKITDVIKDH LNSIVSGARA KEPDAVLADM TRDVQNLLPK
TVGAAK
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