More than 300 homologs were found in PanDaTox collection
for query gene Sros_5409 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_5409  ABC-type sugar transport system periplasmic component-like protein  100 
 
 
457 aa  940    Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3703  extracellular solute-binding protein family 1  45.5 
 
 
466 aa  363  2e-99  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0104923  normal 
 
 
-
 
NC_013131  Caci_8464  extracellular solute-binding protein family 1  39.19 
 
 
481 aa  304  3.0000000000000004e-81  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.635867  normal  0.0842744 
 
 
-
 
NC_012669  Bcav_0910  extracellular solute-binding protein family 1  37.45 
 
 
466 aa  272  1e-71  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.764586  normal 
 
 
-
 
NC_013521  Sked_27350  ABC-type sugar transport system, periplasmic component  35.78 
 
 
444 aa  233  5e-60  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.404715  normal  0.481515 
 
 
-
 
NC_013525  Tter_1095  extracellular solute-binding protein family 1  34.46 
 
 
530 aa  228  3e-58  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013530  Xcel_0063  extracellular solute-binding protein family 1  34.57 
 
 
475 aa  214  2.9999999999999995e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2526  extracellular solute-binding protein family 1  31.34 
 
 
520 aa  208  1e-52  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000430481  n/a   
 
 
-
 
NC_013947  Snas_4693  extracellular solute-binding protein family 1  35.41 
 
 
457 aa  199  7.999999999999999e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.363745 
 
 
-
 
NC_010001  Cphy_3317  extracellular solute-binding protein  29.67 
 
 
492 aa  159  7e-38  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.0000000142443  n/a   
 
 
-
 
NC_011661  Dtur_0175  extracellular solute-binding protein family 1  28.31 
 
 
458 aa  130  4.0000000000000003e-29  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  32.42 
 
 
407 aa  94  5e-18  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_009620  Smed_4159  extracellular solute-binding protein  26.48 
 
 
421 aa  93.2  8e-18  Sinorhizobium medicae WSM419  Bacteria  normal  0.119299  normal  0.873951 
 
 
-
 
NC_012850  Rleg_3910  extracellular solute-binding protein family 1  25.84 
 
 
412 aa  89.4  1e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.198843 
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  28.91 
 
 
420 aa  89  2e-16  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  27.05 
 
 
423 aa  88.6  2e-16  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  26.58 
 
 
504 aa  89  2e-16  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_4883  extracellular solute-binding protein family 1  27.12 
 
 
436 aa  86.3  9e-16  Conexibacter woesei DSM 14684  Bacteria  normal  0.504344  normal 
 
 
-
 
NC_011369  Rleg2_3622  extracellular solute-binding protein family 1  25.33 
 
 
412 aa  86.3  0.000000000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4697  extracellular solute-binding protein family 1  30.14 
 
 
442 aa  85.9  0.000000000000002  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00367387  normal 
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  29.1 
 
 
422 aa  83.6  0.000000000000008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009636  Smed_2146  extracellular solute-binding protein  24.52 
 
 
414 aa  81.6  0.00000000000003  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0690  extracellular solute-binding protein  36.17 
 
 
402 aa  80.9  0.00000000000005  Thermosipho melanesiensis BI429  Bacteria  normal  0.678935  n/a   
 
 
-
 
NC_004311  BRA1180  sugar ABC transporter, periplasmic sugar-binding protein, putative  31.61 
 
 
421 aa  80.1  0.00000000000009  Brucella suis 1330  Bacteria  normal  0.409061  n/a   
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  24.34 
 
 
444 aa  79.7  0.00000000000009  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
NC_010676  Bphyt_7208  extracellular solute-binding protein family 1  32.05 
 
 
410 aa  79.3  0.0000000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  24.93 
 
 
445 aa  79.3  0.0000000000001  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3669  extracellular solute-binding protein family 1  28.33 
 
 
492 aa  79.3  0.0000000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_4083  extracellular solute-binding protein family 1  25.15 
 
 
417 aa  79.3  0.0000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5331  ABC transporter substrate binding protein (sugar)  27.76 
 
 
431 aa  79  0.0000000000002  Agrobacterium vitis S4  Bacteria  normal  0.998389  n/a   
 
 
-
 
NC_009667  Oant_2485  extracellular solute-binding protein  28.52 
 
 
415 aa  78.6  0.0000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00421769  n/a   
 
 
-
 
NC_012854  Rleg_6528  extracellular solute-binding protein family 1  26.04 
 
 
415 aa  78.2  0.0000000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0147922 
 
 
-
 
NC_013526  Tter_2504  extracellular solute-binding protein family 1  26.67 
 
 
442 aa  76.6  0.0000000000007  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  24.48 
 
 
427 aa  76.3  0.000000000001  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2451  extracellular solute-binding protein family 1  30.56 
 
 
449 aa  76.3  0.000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.135643  n/a   
 
 
-
 
NC_009667  Oant_1666  extracellular solute-binding protein  30.97 
 
 
421 aa  76.3  0.000000000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_11620  ABC-type sugar transport system, periplasmic component  24.66 
 
 
426 aa  76.3  0.000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3042  extracellular solute-binding protein  26.32 
 
 
406 aa  75.5  0.000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0658677  normal 
 
 
-
 
NC_009921  Franean1_3944  extracellular solute-binding protein  26.72 
 
 
464 aa  75.1  0.000000000002  Frankia sp. EAN1pec  Bacteria  normal  0.920276  normal  0.0416082 
 
 
-
 
NC_012848  Rleg_4863  extracellular solute-binding protein family 1  27.5 
 
 
492 aa  75.5  0.000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.426159 
 
 
-
 
NC_011369  Rleg2_1773  extracellular solute-binding protein family 1  30.72 
 
 
421 aa  75.1  0.000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0165592 
 
 
-
 
NC_009429  Rsph17025_3553  hypothetical protein  25.86 
 
 
427 aa  74.7  0.000000000003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4688  extracellular solute-binding protein family 1  26.88 
 
 
418 aa  74.3  0.000000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.733472 
 
 
-
 
NC_013131  Caci_6732  extracellular solute-binding protein family 1  27 
 
 
425 aa  73.2  0.000000000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.255639  normal 
 
 
-
 
NC_012669  Bcav_3712  extracellular solute-binding protein family 1  25.4 
 
 
421 aa  72.8  0.00000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.411366 
 
 
-
 
NC_010320  Teth514_1099  extracellular solute-binding protein  25.45 
 
 
457 aa  72.8  0.00000000001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2832  extracellular solute-binding protein family 1  29.57 
 
 
417 aa  72.4  0.00000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.617934  n/a   
 
 
-
 
NC_007952  Bxe_B0420  ABC sugar transporter, periplasmic ligand binding protein  30.34 
 
 
410 aa  72  0.00000000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4632  extracellular solute-binding protein  27.78 
 
 
419 aa  71.6  0.00000000003  Nocardioides sp. JS614  Bacteria  normal  0.448727  n/a   
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  26.71 
 
 
411 aa  71.2  0.00000000004  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  25.48 
 
 
441 aa  70.9  0.00000000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3957  extracellular solute-binding protein family 1  25.66 
 
 
432 aa  70.5  0.00000000005  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008243  Meso_4520  extracellular solute-binding protein  23.13 
 
 
415 aa  70.5  0.00000000005  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  27.97 
 
 
414 aa  70.9  0.00000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_009668  Oant_3895  extracellular solute-binding protein  26.32 
 
 
411 aa  70.9  0.00000000005  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1899  extracellular solute-binding protein, putative  25.21 
 
 
416 aa  70.5  0.00000000006  Bacillus cereus ATCC 10987  Bacteria  normal  0.41529  n/a   
 
 
-
 
NC_007778  RPB_0174  extracellular solute-binding protein  25 
 
 
426 aa  70.1  0.00000000008  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.396862  normal 
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  25.23 
 
 
425 aa  70.1  0.00000000008  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_013205  Aaci_0795  extracellular solute-binding protein family 1  28.9 
 
 
460 aa  70.1  0.00000000008  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.215252  n/a   
 
 
-
 
NC_009664  Krad_0297  extracellular solute-binding protein family 1  27.05 
 
 
453 aa  69.7  0.00000000009  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0248346 
 
 
-
 
NC_012669  Bcav_1296  extracellular solute-binding protein family 1  28.35 
 
 
443 aa  69.7  0.0000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.190784  normal 
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  27.75 
 
 
410 aa  69.3  0.0000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_013526  Tter_2218  extracellular solute-binding protein family 1  26.47 
 
 
479 aa  69.3  0.0000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00910899  n/a   
 
 
-
 
NC_012669  Bcav_1708  extracellular solute-binding protein family 1  23.73 
 
 
458 aa  69.3  0.0000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.190784  normal 
 
 
-
 
NC_012034  Athe_0399  extracellular solute-binding protein family 1  31.01 
 
 
408 aa  69.3  0.0000000001  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.00000000195685  n/a   
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  27.75 
 
 
410 aa  69.3  0.0000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  29.74 
 
 
458 aa  68.6  0.0000000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  29.74 
 
 
458 aa  68.6  0.0000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  29.74 
 
 
458 aa  68.6  0.0000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  29.74 
 
 
458 aa  68.6  0.0000000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  29.74 
 
 
458 aa  68.6  0.0000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  29.74 
 
 
458 aa  68.6  0.0000000002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1895  extracellular solute-binding protein  26.42 
 
 
445 aa  68.6  0.0000000002  Frankia sp. EAN1pec  Bacteria  normal  0.854658  normal 
 
 
-
 
NC_013131  Caci_6904  extracellular solute-binding protein family 1  29.95 
 
 
404 aa  68.6  0.0000000002  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.000382644  hitchhiker  0.00751503 
 
 
-
 
NC_006274  BCZK1634  sugar ABC transporter, sugar-binding protein  24.79 
 
 
416 aa  68.2  0.0000000003  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2731  extracellular solute-binding protein family 1  22.47 
 
 
454 aa  67.8  0.0000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010623  Bphy_4057  extracellular solute-binding protein  29.03 
 
 
410 aa  68.2  0.0000000003  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  29.74 
 
 
458 aa  68.2  0.0000000003  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_2834  extracellular solute-binding protein  30.32 
 
 
459 aa  68.2  0.0000000003  Frankia sp. CcI3  Bacteria  normal  0.873121  normal 
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  29.74 
 
 
458 aa  68.2  0.0000000003  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  29.74 
 
 
458 aa  67.8  0.0000000004  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3151  extracellular solute-binding protein  25.42 
 
 
426 aa  67.4  0.0000000005  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.345086 
 
 
-
 
NC_009504  BOV_A0698  putative sugar ABC transporter, periplasmic sugar-binding protein  26.36 
 
 
366 aa  67  0.0000000007  Brucella ovis ATCC 25840  Bacteria  normal  0.436581  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  28.72 
 
 
458 aa  66.6  0.0000000008  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_2252  extracellular solute-binding protein  27.27 
 
 
469 aa  66.6  0.0000000009  Frankia sp. CcI3  Bacteria  hitchhiker  0.00844632  hitchhiker  0.0063434 
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  23.94 
 
 
447 aa  66.2  0.000000001  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  24.23 
 
 
444 aa  66.2  0.000000001  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_011004  Rpal_0129  extracellular solute-binding protein family 1  24.79 
 
 
426 aa  65.9  0.000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.57996  n/a   
 
 
-
 
NC_010003  Pmob_0523  extracellular solute-binding protein  26.3 
 
 
416 aa  66.2  0.000000001  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  25.31 
 
 
431 aa  66.6  0.000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_013205  Aaci_0770  extracellular solute-binding protein family 1  28.39 
 
 
444 aa  65.9  0.000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1732  extracellular solute-binding protein family 1  24.32 
 
 
415 aa  65.1  0.000000002  Dictyoglomus turgidum DSM 6724  Bacteria  unclonable  0.000000000368486  n/a   
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  24.66 
 
 
439 aa  65.9  0.000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  28.22 
 
 
415 aa  65.5  0.000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_008699  Noca_0059  extracellular solute-binding protein  22.48 
 
 
439 aa  65.5  0.000000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_19770  extracellular solute-binding protein family 1  25 
 
 
423 aa  65.1  0.000000002  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0648  extracellular solute-binding protein family 1  25.48 
 
 
447 aa  65.5  0.000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0354  extracellular solute-binding protein  26.42 
 
 
419 aa  65.5  0.000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.188589  n/a   
 
 
-
 
NC_013526  Tter_2315  extracellular solute-binding protein family 1  24.59 
 
 
503 aa  65.1  0.000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5002  ABC-type sugar transport system periplasmic component-like protein  27.53 
 
 
426 aa  64.7  0.000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.287585  normal  0.158884 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>