| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2832 |
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| Symbol | |
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| ID | 8327021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 3260564 |
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| End bp | 3261817 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644943366 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003100607 |
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| Protein GI | 256376947 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.617934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAAGAA CCGGATTACC TGCCCTCCTG CTCGCCGCCG CGCTCGTCGC GTCGGCCTGC
TCAGGCGGCG GCTCCGGGCA GGACGGCGAC GTCGTGCTCA CGCTGTGGAC CCGCGCGGCC
ACCGAGTCGC TGTCCAAGGC CTACGCCGAG GCGTACAACG CCACGCACTC CACCAAGGTC
GAGGTCACCG CGTACCCCAA CGAGGAGTAC CCGGCCAAGC TCGCCTCGGC GGCGGGCGCG
CGGGCCCTGC CGGACCTGTT CGCCGCCGAC GTGGTCTTCG CGCCCCAGTA CGCCTCCCAG
GGCCTGTGGA CGGACATCAC CGACCGCTTC GAGGGCCTGG AGCACCGGGA GCACCTCGCG
CCGTCGCACG TGCGCGCGGG CACCTGGGAG GACCGCAACT ACGCGCTGCC GCACACCGTC
GACCTGTCGG TGCTGCTGTA CAACAAGGAC CTCTACCGCA AGGCCGGGCT CGACCCGGAG
AAGCCGCCCA CCACGCTGCG CGAGTACGCC GACCACGCCA GGAGGATCCA CGCGCTCGGC
GGCGACGTGC GCGGCACCTA CTTCGGCGGC AACTGCGGCG GCTGCGTCGA GTTCACCTTC
TGGCCCTCGG TGTGGGCCTC CGGTGGTGAC GTGCTGGACG ACGAGGGGGA GCGGGCCACC
CTGGACTCGC CGGAGATGGC CGAGGTCTTC GAGGTCTACC GCTCGCTCTA CGAGGAGGGC
GTCGCCGCGC CCGCGTCCAA GGACGAGGCC GGACCGACCT GGCTCGGCGC GCTGCGCACC
GGCAAGGTCG GCATCGGGCC GGCGGCCTCG GTGTGGCTGG GCGAGATCGC CGAATCCGGG
GCCGACGTGG GACTCGCGCC CATCCCCGGC CTGGACGGCG GCGAGTCCAC GTTCGTCGGC
GGTGACGCCC TCGGCATCGG CGCCACCAGC GAGCACGTCG ACCAGGCCTG GGACTTCCTG
GCCTGGACCA CCACCGAGCA GGCCCAGGTG GGCGTGGTCG CCAAGGGCAA GAACGTGCCG
ACCCGCACCG ACCTGGCCGC CAACGAGCAC GCCGCCGCCG ACCCGCGCCT GGTCACCGCG
AACAGCCTGG TGGCCAAGGG GAGGACGCCG TACGCGCGCA ACTTCAACGC CTCCTTCAAC
GACCCGCAGA GCCCCTGGCT GACCGCGCTG CGCGGCGCCC TGTTCGGCCC CGACCCGGCC
AAGGCGCTCG CCGAGGGCAG CACCGCCATC ACCGCCTCGC TGGGGCAGGG GTGA
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| Protein sequence | MRRTGLPALL LAAALVASAC SGGGSGQDGD VVLTLWTRAA TESLSKAYAE AYNATHSTKV
EVTAYPNEEY PAKLASAAGA RALPDLFAAD VVFAPQYASQ GLWTDITDRF EGLEHREHLA
PSHVRAGTWE DRNYALPHTV DLSVLLYNKD LYRKAGLDPE KPPTTLREYA DHARRIHALG
GDVRGTYFGG NCGGCVEFTF WPSVWASGGD VLDDEGERAT LDSPEMAEVF EVYRSLYEEG
VAAPASKDEA GPTWLGALRT GKVGIGPAAS VWLGEIAESG ADVGLAPIPG LDGGESTFVG
GDALGIGATS EHVDQAWDFL AWTTTEQAQV GVVAKGKNVP TRTDLAANEH AAADPRLVTA
NSLVAKGRTP YARNFNASFN DPQSPWLTAL RGALFGPDPA KALAEGSTAI TASLGQG
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