Gene Rsph17025_3553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3553 
Symbol 
ID5085705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp440943 
End bp442226 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content66% 
IMG OID640485111 
Producthypothetical protein 
Protein accessionYP_001169727 
Protein GI146279569 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCA CCCGTCGTTT CACCCTGGGC GCCGCCGTCT GCGCGCTGGC GCTGCCGAGC 
CTTGCGCACG CCGAGCAGGT CACGTTGAAC GTGCTCTACA ACCTGCCGGG CTTCACGCGC
TTCCATCAGC CATTGGCCGA TGAGTTCATG AAAAAGAACC CGAACGTGAC CATCAACTTT
CTGGCCCCTG CTGTCGGCTA CAACGAAGGG CAGCAACAGG TCCTTCGCTC GGCCGTCACC
GGGAACCTGC CGGACGTCTA CTTCTCGGGC TATAACCTGA CGGCCGAGCT GGTCGAGACG
CTGGCCCCGC GCGGCCAGAT CGTCGATCTG GCCCCCTTCA TCGAGGCTGA GGGCGGGCAG
GCCTTCCTCG ACGAGAACTT CGCGCCCGGC ATGCTGGCGC TCGGCATGGT CAATGGCAAG
CAATACGGGC TGCCGGTCAA CGCCTCCTCG CCCATCATGT ATGTGAACGC CGATCTGGTG
CGCGCGGCGG GCGGCGATCC CGAGAACATG CCGACGACCT TCCCCGAGCT GATCGATCTG
GCCAAGATCA TCCACGAGGC CGATCCGCGC GTCGCCGGCA TGTCCTATGA CATCGCGGGC
TGGCCGGATG ACTGGCTGTG GCAGGCGATG GTCTACCAGC AGGGCGGCCG GCTCATTGAC
CCCGAAACAA ACCAGGTTGC ATTCGACAAC GAGATCGGCC TGAACGGGCT GACCATGATC
CGTCGGATGG CCGCCGAGGC CGGTGCGCCG ACCTTTGACT GGGATCAGGC CCGCCAACAG
TTCGGCGCCG GCATGACCGG GTTCCTGTTC TCGACCCCCG CCCATGTCCA GACAATTGAG
GGGCTGGTCG GCGACCGGTT CGAGCTGGTC ACGACCACCT TCCCGCTGGA CGATCCCGAA
AAAGGCGGCG TGCCGACCGG AGGCAACTCG GCCGTGATGC TGACCCAGGA CAAGGCCAAG
CAGCAGGCGG CCTGGAACTA CATCAAGTGG GTGACCGGCC CGGAGGCGCA GGACATCATC
GTGCGCATCA CCGGCTATCT GCCCACCAAC AAGCGCGCGA CCGGCGAGAA CTACCTGGCG
CCCTACTACG CCGAGCATCC GAATGTCGCG ACCGCAGCGC GCCAGGCCGA CCGCTCGCTG
CCCTGGATTG GTTATCCGGG CGGCGACTCG GTCCGCGTCT GGCGCACGCA GCGCGACATC
ATCGGAACGG TCATGCGCGG CGAGGTCTCA CCTGAGGACG GGCTGGCCCG GATGGTCGAG
CAGACGAACG CGCTGATGCA GTAG
 
Protein sequence
MTFTRRFTLG AAVCALALPS LAHAEQVTLN VLYNLPGFTR FHQPLADEFM KKNPNVTINF 
LAPAVGYNEG QQQVLRSAVT GNLPDVYFSG YNLTAELVET LAPRGQIVDL APFIEAEGGQ
AFLDENFAPG MLALGMVNGK QYGLPVNASS PIMYVNADLV RAAGGDPENM PTTFPELIDL
AKIIHEADPR VAGMSYDIAG WPDDWLWQAM VYQQGGRLID PETNQVAFDN EIGLNGLTMI
RRMAAEAGAP TFDWDQARQQ FGAGMTGFLF STPAHVQTIE GLVGDRFELV TTTFPLDDPE
KGGVPTGGNS AVMLTQDKAK QQAAWNYIKW VTGPEAQDII VRITGYLPTN KRATGENYLA
PYYAEHPNVA TAARQADRSL PWIGYPGGDS VRVWRTQRDI IGTVMRGEVS PEDGLARMVE
QTNALMQ