More than 300 homologs were found in PanDaTox collection
for query gene Caci_6732 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_6732  extracellular solute-binding protein family 1  100 
 
 
425 aa  853    Catenulispora acidiphila DSM 44928  Bacteria  normal  0.255639  normal 
 
 
-
 
NC_014165  Tbis_2714  extracellular solute-binding protein family 1  58.22 
 
 
414 aa  452  1.0000000000000001e-126  Thermobispora bispora DSM 43833  Bacteria  normal  0.36636  normal 
 
 
-
 
NC_013595  Sros_3956  ABC-type sugar transport system periplasmic component-like protein  54.75 
 
 
416 aa  447  1.0000000000000001e-124  Streptosporangium roseum DSM 43021  Bacteria  normal  0.282171  normal  0.0187852 
 
 
-
 
NC_012669  Bcav_1955  extracellular solute-binding protein family 1  46.39 
 
 
419 aa  355  8.999999999999999e-97  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.974693  hitchhiker  0.000475348 
 
 
-
 
NC_013530  Xcel_1138  extracellular solute-binding protein family 1  46.15 
 
 
423 aa  337  1.9999999999999998e-91  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.443513  n/a   
 
 
-
 
NC_013521  Sked_06340  maltose-binding periplasmic protein  46.62 
 
 
409 aa  336  3.9999999999999995e-91  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.211092  normal 
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  35.06 
 
 
420 aa  184  2.0000000000000003e-45  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_012034  Athe_0399  extracellular solute-binding protein family 1  35.14 
 
 
408 aa  180  4e-44  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.00000000195685  n/a   
 
 
-
 
NC_011831  Cagg_2267  extracellular solute-binding protein family 1  33.11 
 
 
445 aa  155  1e-36  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00064551 
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  35.4 
 
 
422 aa  153  5e-36  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_0144  extracellular solute-binding protein  31.2 
 
 
403 aa  147  4.0000000000000006e-34  Petrotoga mobilis SJ95  Bacteria  normal  0.442205  n/a   
 
 
-
 
NC_008698  Tpen_1152  extracellular solute-binding protein  33.22 
 
 
393 aa  144  4e-33  Thermofilum pendens Hrk 5  Archaea  normal  0.0401617  n/a   
 
 
-
 
NC_008025  Dgeo_0751  extracellular solute-binding protein  33.92 
 
 
411 aa  138  2e-31  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0314212  normal 
 
 
-
 
NC_014212  Mesil_2792  extracellular solute-binding protein family 1  33.58 
 
 
411 aa  137  4e-31  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.199618 
 
 
-
 
NC_008528  OEOE_0253  ABC-type sugar transport system, periplasmic component  31.63 
 
 
424 aa  135  9e-31  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0913  extracellular solute-binding protein family 1  31.07 
 
 
421 aa  133  6e-30  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_00380  extracellular solute-binding protein family 1  30.27 
 
 
422 aa  133  6e-30  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4083  extracellular solute-binding protein family 1  32.65 
 
 
417 aa  126  7e-28  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3042  extracellular solute-binding protein  31.12 
 
 
406 aa  121  3e-26  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0658677  normal 
 
 
-
 
NC_013946  Mrub_0630  extracellular solute-binding protein family 1  30.4 
 
 
410 aa  117  3e-25  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.505283 
 
 
-
 
NC_013739  Cwoe_3983  extracellular solute-binding protein family 1  27.85 
 
 
456 aa  103  4e-21  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2611  extracellular solute-binding protein family 1  27.58 
 
 
453 aa  100  5e-20  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.058641  normal 
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  27.32 
 
 
461 aa  99.4  1e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_008699  Noca_4632  extracellular solute-binding protein  28.81 
 
 
419 aa  99.4  1e-19  Nocardioides sp. JS614  Bacteria  normal  0.448727  n/a   
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  28.2 
 
 
427 aa  97.8  3e-19  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0385  extracellular solute-binding protein family 1  27.41 
 
 
410 aa  97.1  5e-19  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0390662 
 
 
-
 
NC_013131  Caci_4984  extracellular solute-binding protein family 1  29.05 
 
 
432 aa  96.7  6e-19  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.000108283  decreased coverage  0.000897425 
 
 
-
 
NC_013172  Bfae_06270  ABC-type sugar transport system, periplasmic component  25.19 
 
 
426 aa  97.1  6e-19  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3465  extracellular solute-binding protein  28.15 
 
 
411 aa  96.7  8e-19  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0729  extracellular solute-binding protein family 1  27.7 
 
 
443 aa  95.9  1e-18  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0000254304  normal 
 
 
-
 
NC_013131  Caci_4320  extracellular solute-binding protein family 1  27.79 
 
 
425 aa  95.1  2e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.811375  hitchhiker  0.00841489 
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  25.51 
 
 
423 aa  94.4  4e-18  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_1698  extracellular solute-binding protein family 1  29.67 
 
 
447 aa  94.4  4e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1711  extracellular solute-binding protein family 1  28.4 
 
 
454 aa  94  5e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.795485  normal 
 
 
-
 
NC_012669  Bcav_1680  extracellular solute-binding protein family 1  27.16 
 
 
430 aa  92.4  1e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.173253  normal 
 
 
-
 
NC_013205  Aaci_2049  extracellular solute-binding protein family 1  26.65 
 
 
438 aa  92.8  1e-17  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.266449  n/a   
 
 
-
 
NC_013131  Caci_7906  extracellular solute-binding protein family 1  28.19 
 
 
420 aa  92  2e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.819994  normal 
 
 
-
 
NC_013947  Snas_3121  extracellular solute-binding protein family 1  30.38 
 
 
445 aa  91.3  3e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00116931 
 
 
-
 
NC_013595  Sros_3538  Maltose-binding periplasmic protein/domains- like protein  24.36 
 
 
406 aa  90.9  3e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  0.385239  normal 
 
 
-
 
NC_011366  Rleg2_5687  extracellular solute-binding protein family 1  26.83 
 
 
401 aa  90.9  4e-17  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.627079  normal 
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  28.33 
 
 
424 aa  90.9  4e-17  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  25.97 
 
 
444 aa  90.5  5e-17  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
NC_013739  Cwoe_3957  extracellular solute-binding protein family 1  25.76 
 
 
432 aa  90.5  5e-17  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_6631  extracellular solute-binding protein family 1  26.22 
 
 
410 aa  89.7  1e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.325237 
 
 
-
 
NC_011988  Avi_6240  ABC transporter substrate binding protein (maltose)  27.78 
 
 
407 aa  89.4  1e-16  Agrobacterium vitis S4  Bacteria  normal  0.0994607  n/a   
 
 
-
 
NC_003909  BCE_1899  extracellular solute-binding protein, putative  23.8 
 
 
416 aa  88.6  2e-16  Bacillus cereus ATCC 10987  Bacteria  normal  0.41529  n/a   
 
 
-
 
NC_011899  Hore_00780  extracellular solute-binding protein family 1  26.67 
 
 
411 aa  88.2  2e-16  Halothermothrix orenii H 168  Bacteria  normal  0.0480859  n/a   
 
 
-
 
NC_009620  Smed_4644  extracellular solute-binding protein  26.33 
 
 
409 aa  89  2e-16  Sinorhizobium medicae WSM419  Bacteria  normal  0.0265502  normal  0.0904039 
 
 
-
 
NC_012669  Bcav_3572  extracellular solute-binding protein family 1  23.36 
 
 
427 aa  87.8  3e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.405751  normal 
 
 
-
 
NC_006274  BCZK1634  sugar ABC transporter, sugar-binding protein  24.02 
 
 
416 aa  87.4  4e-16  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2582  extracellular solute-binding protein family 1  27.39 
 
 
416 aa  87.8  4e-16  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3149  extracellular solute-binding protein  26.61 
 
 
427 aa  87  5e-16  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  23.22 
 
 
414 aa  87  6e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  25 
 
 
424 aa  86.3  9e-16  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  27.3 
 
 
447 aa  85.9  0.000000000000001  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
NC_012854  Rleg_6528  extracellular solute-binding protein family 1  25.58 
 
 
415 aa  85.1  0.000000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0147922 
 
 
-
 
NC_007760  Adeh_4136  ABC sugar transporter, periplasmic ligand binding protein  29.31 
 
 
400 aa  84.7  0.000000000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011370  Rleg2_6090  extracellular solute-binding protein family 1  27.73 
 
 
425 aa  84.7  0.000000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_4289  extracellular solute-binding protein family 1  30 
 
 
400 aa  84.7  0.000000000000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.53848  n/a   
 
 
-
 
NC_011145  AnaeK_4267  extracellular solute-binding protein family 1  30 
 
 
400 aa  84  0.000000000000005  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6904  extracellular solute-binding protein family 1  28.1 
 
 
404 aa  84  0.000000000000005  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.000382644  hitchhiker  0.00751503 
 
 
-
 
NC_013411  GYMC61_2731  extracellular solute-binding protein family 1  25.62 
 
 
454 aa  83.6  0.000000000000007  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_006274  BCZK3770  maltosaccharide ABC transporter, maltosaccharide-binding protein  26.97 
 
 
419 aa  83.2  0.000000000000008  Bacillus cereus E33L  Bacteria  hitchhiker  0.000087749  n/a   
 
 
-
 
NC_011773  BCAH820_4032  putative maltosaccharide ABC transporter, maltosaccharide-binding protein  26.97 
 
 
419 aa  83.2  0.000000000000009  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS3922  maltosaccharide ABC transporter maltosaccharide-binding protein  26.97 
 
 
419 aa  83.2  0.000000000000009  Bacillus anthracis str. Sterne  Bacteria  normal  0.0134813  n/a   
 
 
-
 
NC_007530  GBAA_4229  maltosaccharide ABC transporter maltosaccharide-binding protein  26.97 
 
 
419 aa  83.2  0.000000000000009  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.749727  n/a   
 
 
-
 
NC_003909  BCE_4064  maltosaccharide ABC transporter, maltosaccharide-binding protein, putative  26.69 
 
 
419 aa  82.4  0.00000000000001  Bacillus cereus ATCC 10987  Bacteria  normal  0.0421403  n/a   
 
 
-
 
NC_013159  Svir_16660  ABC-type sugar transport system, periplasmic component  24.89 
 
 
406 aa  82.4  0.00000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.613471  normal 
 
 
-
 
NC_013947  Snas_2758  extracellular solute-binding protein family 1  27.93 
 
 
423 aa  82.8  0.00000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.736779  normal 
 
 
-
 
NC_011884  Cyan7425_3276  extracellular solute-binding protein family 1  23.93 
 
 
420 aa  82.8  0.00000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  0.147153  normal  0.336546 
 
 
-
 
NC_009832  Spro_2571  extracellular solute-binding protein  24.39 
 
 
417 aa  82.4  0.00000000000001  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_3754  maltose-maltodextrin ABC-related solute binding protein  26.69 
 
 
419 aa  82  0.00000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00000542287  n/a   
 
 
-
 
NC_007413  Ava_4289  extracellular solute-binding protein  26.58 
 
 
466 aa  82  0.00000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_3709  extracellular solute-binding protein  25.55 
 
 
437 aa  82  0.00000000000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0405  ABC-type sugar transport system periplasmic component-like protein  30.11 
 
 
438 aa  81.6  0.00000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3910  extracellular solute-binding protein family 1  24.91 
 
 
412 aa  81.6  0.00000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.198843 
 
 
-
 
NC_011725  BCB4264_A4119  putative maltosaccharide ABC transporter, maltosaccharide-binding protein  26.69 
 
 
419 aa  82  0.00000000000002  Bacillus cereus B4264  Bacteria  hitchhiker  0.000674051  n/a   
 
 
-
 
NC_013521  Sked_03920  carbohydrate-binding protein  26.38 
 
 
437 aa  81.6  0.00000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_3575  carbohydrate ABC transporter periplasmic-binding protein  25.55 
 
 
437 aa  82  0.00000000000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3339  Maltose-binding periplasmic protein/domains- like protein  25.87 
 
 
431 aa  82  0.00000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.202326 
 
 
-
 
NC_010159  YpAngola_A4016  carbohydrate ABC transporter periplasmic-binding protein  25.55 
 
 
437 aa  82  0.00000000000002  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  26.42 
 
 
415 aa  81.3  0.00000000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_011658  BCAH187_A4138  putative maltosaccharide ABC transporter, maltosaccharide-binding protein  26.69 
 
 
419 aa  81.3  0.00000000000003  Bacillus cereus AH187  Bacteria  hitchhiker  0.00348898  n/a   
 
 
-
 
NC_009636  Smed_2146  extracellular solute-binding protein  25.82 
 
 
414 aa  81.3  0.00000000000003  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  25.86 
 
 
407 aa  81.6  0.00000000000003  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_0753  extracellular solute-binding protein  25.57 
 
 
429 aa  81.3  0.00000000000003  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00037903  n/a   
 
 
-
 
NC_013739  Cwoe_4883  extracellular solute-binding protein family 1  24.92 
 
 
436 aa  80.9  0.00000000000004  Conexibacter woesei DSM 14684  Bacteria  normal  0.504344  normal 
 
 
-
 
NC_013595  Sros_4883  ABC-type sugar transport system periplasmic component-like protein  26.2 
 
 
417 aa  80.5  0.00000000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.134037  normal  0.0630481 
 
 
-
 
NC_007952  Bxe_B0420  ABC sugar transporter, periplasmic ligand binding protein  27.02 
 
 
410 aa  80.1  0.00000000000007  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0183  extracellular solute-binding protein family 1  25.83 
 
 
429 aa  80.1  0.00000000000007  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_4688  extracellular solute-binding protein family 1  27.72 
 
 
418 aa  79.7  0.00000000000008  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.733472 
 
 
-
 
NC_011661  Dtur_0381  extracellular solute-binding protein family 1  25.91 
 
 
421 aa  79.3  0.0000000000001  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_2552  extracellular solute-binding protein  23.63 
 
 
443 aa  79  0.0000000000001  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.00000382941 
 
 
-
 
NC_010623  Bphy_4057  extracellular solute-binding protein  26.67 
 
 
410 aa  79  0.0000000000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_7208  extracellular solute-binding protein family 1  26.15 
 
 
410 aa  78.6  0.0000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2403  extracellular solute-binding protein  27 
 
 
441 aa  78.6  0.0000000000002  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_3841  extracellular solute-binding protein  26.4 
 
 
419 aa  78.6  0.0000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  decreased coverage  0.000013033  n/a   
 
 
-
 
NC_014248  Aazo_0323  family 1 extracellular solute-binding protein  27.82 
 
 
432 aa  77.8  0.0000000000003  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2818  extracellular solute-binding protein  25.19 
 
 
488 aa  78.2  0.0000000000003  Roseiflexus sp. RS-1  Bacteria  normal  0.179577  normal 
 
 
-
 
NC_013235  Namu_0514  extracellular solute-binding protein family 1  26 
 
 
426 aa  78.2  0.0000000000003  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
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