Gene Sked_06340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_06340 
Symbol 
ID8632271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp715282 
End bp716511 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content71% 
IMG OID 
Productmaltose-binding periplasmic protein 
Protein accessionYP_003313428 
Protein GI269793973 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.211092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCA CGACACGGCT CGCCACGGCA ATGACCGCCG TCGGAGCCCT CACCCTGACC 
GCCTGCGGAG GGTCGGGGTT CGACGACGAC ACCTCGACCG AGGACGCCGC AGGCCGCTCG
ATCTCCGTCC TCATCGGGTC CTCGGGCGAC GCCGAGACCG CCGCGGTCAC GGCCGCCGTC
GACGCGTGGT CGGCCGAGTC CGGGGTGGAC GCGACGGTCA ACGTCGCGTC CGACCTCAGC
CAGCAGCTGT CGCAGGGCTT CGCGGGAGGC AGCCCGGCCG ACGTCTTCTA CCTCACCAAC
GACACCGTGG CGACGTACGC CTCGAACGGC TCTCTCGACG CCTACGTCGA CGGCCTGGCG
AACGTCGACG ACTTCTACCC GAACGTCCTG GACTCGTTCA CCTACGACTC CGAGGTGTAC
GCCGCGCCCA AGGACTTCTC GACGCTGGCG CTCATCATCA ACACCGACCT GTGGGCGGCG
GCCGGCCTGA CCGACGCCGA CGTCCCGACG ACCTGGGACG AGCTCGAGAC CGTCGCCGCC
GCGCTGACCA CCGACACGAC GGTCGGCCTG GCGATCAGCC CGGAGTTCGC GCGGGTCGGG
GCGTTCTTCG CCCAGAACGG CGGCTGGCTG GTCGACGAGG ACGGGACGCC GGCGGCCGAC
TCGCCCGAGA ACGTCGAGGC CCTCACCTAC GTCAAGGACC TCATGGCTGC CGGGTCGCTC
AAGTACGCGA CCGACGTCGG TGCGGGCTGG GGCGGCGAGG CCTTCGGGAC CGGTGCCGCG
GCGATGACCA TCGAGGGCAA CTGGATCACC GGGGCCCTGA CCAACGACTA CCCGGACGTC
GCCTACACCG TCGCCGAGCT CCCGGCCGGT CCCGCGGGCA AGGGCACCAT CCAGTTCAAC
GGAGGGTGGG GCGTCGCCGC GGACTCCCCG TCCAAGGACG ACGCGACCGC GCTGGTCGAG
TACCTCACGC AGCCCGAGCA GCAGCTCGGC TTCTCGGAGG CCTTCGGGGT CATGCCCGCG
GTGCTCTCGG CGGCCGACAC CTGGAAGACC GACAACCCCG ACCTCGCGCC GTTCCTCGAG
GGCGCGGACT ACGCGCGGTC CATCCCGAGC GTCGTGGGCA TCTCGGACGT CGTCGAGGAC
CTCAATGCGC AGCTGCAGGC GCTGAGCAGC GGCGACCCGC AGACCATCCT CGACTCGACG
CAGCAGAACC TCGAGGCGAT CGTCCCCTGA
 
Protein sequence
MRTTTRLATA MTAVGALTLT ACGGSGFDDD TSTEDAAGRS ISVLIGSSGD AETAAVTAAV 
DAWSAESGVD ATVNVASDLS QQLSQGFAGG SPADVFYLTN DTVATYASNG SLDAYVDGLA
NVDDFYPNVL DSFTYDSEVY AAPKDFSTLA LIINTDLWAA AGLTDADVPT TWDELETVAA
ALTTDTTVGL AISPEFARVG AFFAQNGGWL VDEDGTPAAD SPENVEALTY VKDLMAAGSL
KYATDVGAGW GGEAFGTGAA AMTIEGNWIT GALTNDYPDV AYTVAELPAG PAGKGTIQFN
GGWGVAADSP SKDDATALVE YLTQPEQQLG FSEAFGVMPA VLSAADTWKT DNPDLAPFLE
GADYARSIPS VVGISDVVED LNAQLQALSS GDPQTILDST QQNLEAIVP