Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_16660 |
Symbol | |
ID | 8386998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1719763 |
End bp | 1720983 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644975742 |
Product | ABC-type sugar transport system, periplasmic component |
Protein accession | YP_003133526 |
Protein GI | 257055694 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.613471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAAGAC GATCGCGGGC CACTGCCCTG GTCGCGGCGA CCGCGATAGC GCTCACCGCC TGCTCGGGCG GAGGCTCGGA CGACGGCAGT GTCGAACTGA CGATGCTCGC GGCGTCCTAT TCGGACAACA CGAAGAAGCT CTGGGAGGAG GTGATCGCAG AGTTCGAGGA CGCCAACCCG GGCGTGACCG TCAACCTGGA GATCCAGTCG TGGGAGAACA TCAACGACGT CATCCGCACG CGGGTGCAGA CGAACAAAGC CCCCGACATC CTGAGCATCG ACACCTTCGC CGGGTACGTG GAGGACGACC TGTTGTACTC GGCTGACGAG TTGGTGTCGC AGGAGACGAT CGACGACTTC CAGGATTCCT TCCGGGAGAA CGCCTCCGTC GACGGCAAAC AGTACGGCTT CCCCCTGATC GCCTCGGCGA GGGCCCTGTT CGTCAACGAC GACCTGCTGG AGCAGGCGGG CGTCGAAGAA CCGCCCACGA CCTGGGACGA GCTGTACGAC GCGGCGAAGG CGATCACCGA ATCCACCGAC GCCTACGGCT ACGGTCTCCC GCTCGGGTCG GAGGAATCGC AGGCCGAGGC GGGAATCTGG TTCCTCGGCG CGGGCGGCGG CTACGGCACG CCGGACAAGA TCACCGTGGA CACGCCCCAG AACCTGGAGG CGGCGCGGTT CATGAAGCGC CTCTACGACG ACGGCTTGAC CCAGCCCGAC GCCGGAGCCA CCCAGCGCAC TCCCATGCTG GACCAGTTCA TCCAGGGCAA ATTCGGCATG GCGATGGGTC TTCCACCGAT CGTGGGCATG ATCGAGGAGA AGAACCCCGA CCTGAATTAC TCCATCGTGG ACATTCCCAC GAAGGACGGC GAGAAGGTGA CGTTGGGTGT GGCCGACCAC CTCATGGCCT TCCGCAACGA CGAGGACAAG ACGGAGGAGA TCGGGGCGTT CCTCGAATTC TTCTACCAGC CGGAGAACTA CCTGAAGTTC GTCGAGACCG AGGGTTTCCT GCCCGTCACC AAGTCCGGCG CGGAGGAGAG CACCGACGAG GCCATGAAAC CGTTCCTCGA ACTGTTGCCC CACGCGCAGT TCTACCCGTC GACCAACCCC GCGTGGGCCA CTGCCCAGGC GGCCATGCAG TCACAGATCG GGTTGATCGT CTCGGGTGAC GACCCGAAAC AGGTGTTGTC CGCCATCCAA GCCGAGATCG ACAACGCCTG A
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Protein sequence | MTRRSRATAL VAATAIALTA CSGGGSDDGS VELTMLAASY SDNTKKLWEE VIAEFEDANP GVTVNLEIQS WENINDVIRT RVQTNKAPDI LSIDTFAGYV EDDLLYSADE LVSQETIDDF QDSFRENASV DGKQYGFPLI ASARALFVND DLLEQAGVEE PPTTWDELYD AAKAITESTD AYGYGLPLGS EESQAEAGIW FLGAGGGYGT PDKITVDTPQ NLEAARFMKR LYDDGLTQPD AGATQRTPML DQFIQGKFGM AMGLPPIVGM IEEKNPDLNY SIVDIPTKDG EKVTLGVADH LMAFRNDEDK TEEIGAFLEF FYQPENYLKF VETEGFLPVT KSGAEESTDE AMKPFLELLP HAQFYPSTNP AWATAQAAMQ SQIGLIVSGD DPKQVLSAIQ AEIDNA
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