Gene Snas_2758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2758 
Symbol 
ID8883956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2903065 
End bp2904336 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content68% 
IMG OID 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003511527 
Protein GI291300249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.736779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATTC GCGCGCTGGC CCTCGCCACC GTCCTGGTCC TCACCGCCTC CGGCTGCGCC 
ACCAGCAGTT TCGGCGACGA ACCCGGCAAG ACCCTGACGG TGCTGACCCA CTACGGCAGC
GAACCCCACA AGTCCGGGCT GAAGAAACTC GTCGACGAGT GGAACCGCAC CCACCCCGAG
GTCCAGGTCA AGACGCAGTC GGTGCTGTAC AACGAACTGC TGCAAACCGT CACCGCCCGC
CACGCCTCCG GCCAGACCCC CGACATCATC AACGCCTACA GCCTGTGGGG CGGCCAGCTC
GCCGCCGCCG ACGTCCTGGA CGAACCGCCC ACCGACGTCG CCACCGACAT CCGCGACGAG
TACTCACCGG CCGCGTCCGA AGCCGTCACG GTGGACGACC AGGTGCTGGG TTACCCGACC
GAGATGCAGA CCTACGCCCT GATCTACAAC AAGAAACTGC TGGCGAAGGC GGGTGTGACC
GAGCCGCCGA AGACCTGGGA CGAACTGGAG GACATCGCCG AAAGGACCAC CGTCACCGAC
GACAGCGGCA ACCTCGACGT GGCCGGTTTC GGTCTGACCA CGGACTTCTC CGACACCGCC
GTGGTGCACC CGTTCGCGTC GCTGTTGCAG GCGGCGGGCG GCCGGTACAT GAACGCCGAC
GGGAGCGCCG CCTTCGACTC CAAGGCTGGA CAGCGGGCAC TGTCGCTACA GAAACAGCTC
GTCGAGTCCG GTTCCGCGGA CCCGGGACTC AACACCATCA AGGCGTTCCC CAGCAACCGG
GTCGCCATGA CCATCAACGC CGGATACTGG ATCGGCGTCC TGAAGGGAAT GATGGGCGAC
GACTACGAGA ACGTCGGCGT CGCACCGATC CCCGGCCCGA AGGCCGGGGA CAAGGGGTCG
CTCGCCTACG GCTTCTTCAC CGGCGTCAGC TCCCACAGCG ACCAGAAGGA CGACGCCTGG
GAGTTCCTGC GCTGGCTCAA CGCCGAGCAG GCCGCCGACG GCGCCACCCG GATGGGCGCG
TTCCAGTTCG GCGCCGGAAG CATCCCCGCC CGGGTCTCCG ACAGCGAAGC CCTCACCGCC
GACGACCCCA ACTTCGAGCC CTTCGTCCAG GCCATGGACT ACGCGCTGCC GGAACCCAAT
CCGCGTGGCG GCCAGCAGAT GAAGACCGCG CTACAGGGCA GCATCCAGTC GGTGTGGACG
GGCGACCTCT CCGTGGCCGA GGCACTGCGA TCCGCCGCCG CCGAAGCCGA CGCCACCCTC
AACCAGGACT GA
 
Protein sequence
MRIRALALAT VLVLTASGCA TSSFGDEPGK TLTVLTHYGS EPHKSGLKKL VDEWNRTHPE 
VQVKTQSVLY NELLQTVTAR HASGQTPDII NAYSLWGGQL AAADVLDEPP TDVATDIRDE
YSPAASEAVT VDDQVLGYPT EMQTYALIYN KKLLAKAGVT EPPKTWDELE DIAERTTVTD
DSGNLDVAGF GLTTDFSDTA VVHPFASLLQ AAGGRYMNAD GSAAFDSKAG QRALSLQKQL
VESGSADPGL NTIKAFPSNR VAMTINAGYW IGVLKGMMGD DYENVGVAPI PGPKAGDKGS
LAYGFFTGVS SHSDQKDDAW EFLRWLNAEQ AADGATRMGA FQFGAGSIPA RVSDSEALTA
DDPNFEPFVQ AMDYALPEPN PRGGQQMKTA LQGSIQSVWT GDLSVAEALR SAAAEADATL
NQD