Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7906 |
Symbol | |
ID | 8339283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9177412 |
End bp | 9178674 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644960990 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003118570 |
Protein GI | 256397006 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.819994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCGAA AGGCGTTGGT GCTGGTCGGC GCCGGGGCTC TGGCCCTGGC CGCGACCGGC TGTTCCTCCT CGAAATCCGC GTCGTCCGGA CAGGCCGACT CCGGTCCGGT CACCCTCACC TACGGCATCT GGGACACCAA GCAGAAGCCG GCGATGCAGG AGATCGCCGA CGCCTTCCAC GCGGCGCACC CGAACATCAC CATCGACATC CAGCTGACGC CGAACGCCGA CTACTGGACC AAGCTCCAGA CCGCGGCCGC CTCCGGGACC GCGCCGGACG TCTTCTGGAT GAACACCCCG CGCGTCGGCC TGTACGCCGG CCAGCACCAG CTGCTCTCGC TGTCGGACAA GCCCGGCTTC GACAACAGCC CGTTCCCGAA GTCCCTGAAC GCCAGCTACA CCCTCGACGG CAAGCAGTAC GGCATGCCGA AGGACTTCGA CACCGTCGGG CTCTGGTACA ACAAGAAGCT TTTCGACGCC GCCGGGGTGA AATACCCGAC CGCGAGTTGG ACCTGGCAGG ACGTGATCAG CGCGGCCCAG AAGCTGAACG ACCCGGGCAA GGGCGTGTGG GGCATCGCCT CGCCGGACTG GACGCAGGAG AACCTGTTCA ACACCATCCT CCAGGCCGGC GGCCAGCCCA TCACCCCGGA CCACAAGAAG TCCGGGTTCG ACGACCCGAA GAGCGTCGCC GGCCTGCAGT ACGCGCTGGA CTTCATCACC AAGTACCACG TCTCGCCGAC CGCGCAGCAG ATGACCGACA CCCAGCCGGA CCAGCTGTTC GCCTCGGGCA AGGCGGCCAT GTTCGCCGAC GGCGACTACG ACATGCCCGA GTACAAGGCG GCGGCCGGCC TGGACGCCGA CGTCGCGCCG CTGCCGGCCG GTCCGGACGG CAAGCAGGCG ACCGTCATCA ACGGCCTGGC GAACGTCATC TACGCCAAGA CCAAGCATCC GCAGGCCGCC TGGGAGTTCG TGCAGTTCCT CGGCTCCAAG CAGGCCAACG AGATCCAGGC CAAGACCGGC ACCGTGATCC CGGCCTACAA CGGTCTGTCC GCGACCTGGG TCGCCTCGAC CCCGCAGTAC CACCTGCAGT CCTTCATCGA CCAGCTGGCC GTCGCGGTGC CCTACCCGGT GTCGAAGAAC ACCGCGGCCT GGGCCACGCC GATGCAGGCC ACGCTGGACC AGATCTGGGG CGGCAAGCTC GACCTGCAGA CCGGCGCCAA GCAGATCGCG GACCAGATGA ACGCCGAACT GGCCAAGGAG TAG
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Protein sequence | MFRKALVLVG AGALALAATG CSSSKSASSG QADSGPVTLT YGIWDTKQKP AMQEIADAFH AAHPNITIDI QLTPNADYWT KLQTAAASGT APDVFWMNTP RVGLYAGQHQ LLSLSDKPGF DNSPFPKSLN ASYTLDGKQY GMPKDFDTVG LWYNKKLFDA AGVKYPTASW TWQDVISAAQ KLNDPGKGVW GIASPDWTQE NLFNTILQAG GQPITPDHKK SGFDDPKSVA GLQYALDFIT KYHVSPTAQQ MTDTQPDQLF ASGKAAMFAD GDYDMPEYKA AAGLDADVAP LPAGPDGKQA TVINGLANVI YAKTKHPQAA WEFVQFLGSK QANEIQAKTG TVIPAYNGLS ATWVASTPQY HLQSFIDQLA VAVPYPVSKN TAAWATPMQA TLDQIWGGKL DLQTGAKQIA DQMNAELAKE
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