| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4883 |
|---|
| Symbol | |
|---|
| ID | 8668177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5407006 |
|---|
| End bp | 5408259 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | ABC-type sugar transport system periplasmic component-like protein |
|---|
| Protein accession | YP_003340443 |
|---|
| Protein GI | 271966247 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.134037 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0630481 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATC TGACGCGGCG TGGGCTACTC GCCGCCGGCG CGCTCACCCT GCTCGCCGGA
TGCGGCAAGG ACCAGCCTCG GCAGCAGGCC GCGGACGGCA GGCCGCACGG CGAGGTCACC
GTCTGGCTGC ACGGCTCGCA GGACACCGGC CAGCAGTTCC AGGAGCTCGT GCACCGCTAC
ATCGCCGAGT TCAAGGTCGA CGTGAAGCTG CTCTACCTGC CCGTGGGCCA GCTCGACGCC
AAACTGCTGA CCGCCTTCAG CGGCGGCGCC CCGCCCGACG TCTTCAAGAT CGGCCACTGG
AGCTTCCCCG CGCACGCCAA GAAGAAGCGG CTCGCGCCCG TCGACACCAA GGCGCTCTCG
CTACAGAACT ACGAGCCGGG CACGACCACC CCGCTCACCT ACCAGGACGT GCCCTACGGC
GTGCCCATCG ACTTCAACCC CTGCATGCTC TACTACCGCA AGGACCGGTT CGAGGAGGCC
GGACTCGACC CCGACAAGCC CCCGGCGACC TGGGAGGAGG TCGCCGACTA CAGCGCCAAG
CTCACCTCCG GGGACCGCAG GCGAGTCGGC CTGCAGTGGC TCTACGGCGA CCCGCAGTGG
GCCCTCATGA CGCTGACCGC CCTCGTCCAG GGCAAGGGCG GCGAGCTCGT CGCGGCGGGC
GGCGCGAAGG CGTCGCTGGC CACCGAGCAG GGCATCGACG CCCTGACGTA CATGTCGGGT
ATCGGCAACC CCAAGCTCTC CAACCCGCTG GGCTCGCTCG GCCTGTTCTA CTCCGGCGAG
GCCGCCATGG TCGTCAGCGG CGCCTTCCTC GGCCCCGCGC TGGAGAAGCT GGGCAAGGAC
AAGCTCACCT TCGGCAAGCA GTACGGCGTC GCGCCCATGC CCACCTGGGC CGGCGGCCCG
CCCGTCGTTC CCGCCTACAC CTGGGGCTGG GGCGTGGCCA AGGACTCGCC CAACCAGTTC
ACCGCCTGGC ACCTCGTCAA CTACCTGCAG GGCGCCCCGT CGGTGACCGC CAACCTCGAC
AACGGCATCA TCATCCCGAC CAAGGGCTGG CGCGACGCCG GGCCGCGCGG CAAGTCCGAG
ATCATGAAGA TCGTCGCCGA CAGCCTCCCG CATGTCGACT TCGGCCCGAT CATCCCCGGC
ACCCTCGAAC TGGCGAAGGC CGCGGCCGGC GCCGTCGACT CCGTCGCCCA CGGCAAGTCG
ACCCCCGCCC AGGCCGCGGC GGCCTTCGAC TCCGCCGTGC GACCGGTCCT GTGA
|
|---|
| Protein sequence | MADLTRRGLL AAGALTLLAG CGKDQPRQQA ADGRPHGEVT VWLHGSQDTG QQFQELVHRY
IAEFKVDVKL LYLPVGQLDA KLLTAFSGGA PPDVFKIGHW SFPAHAKKKR LAPVDTKALS
LQNYEPGTTT PLTYQDVPYG VPIDFNPCML YYRKDRFEEA GLDPDKPPAT WEEVADYSAK
LTSGDRRRVG LQWLYGDPQW ALMTLTALVQ GKGGELVAAG GAKASLATEQ GIDALTYMSG
IGNPKLSNPL GSLGLFYSGE AAMVVSGAFL GPALEKLGKD KLTFGKQYGV APMPTWAGGP
PVVPAYTWGW GVAKDSPNQF TAWHLVNYLQ GAPSVTANLD NGIIIPTKGW RDAGPRGKSE
IMKIVADSLP HVDFGPIIPG TLELAKAAAG AVDSVAHGKS TPAQAAAAFD SAVRPVL
|
|---|
| |