More than 300 homologs were found in PanDaTox collection
for query gene Bcav_1955 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_1955  extracellular solute-binding protein family 1  100 
 
 
419 aa  817    Beutenbergia cavernae DSM 12333  Bacteria  normal  0.974693  hitchhiker  0.000475348 
 
 
-
 
NC_013521  Sked_06340  maltose-binding periplasmic protein  60.1 
 
 
409 aa  455  1e-127  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.211092  normal 
 
 
-
 
NC_013530  Xcel_1138  extracellular solute-binding protein family 1  58.99 
 
 
423 aa  451  1e-125  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.443513  n/a   
 
 
-
 
NC_014165  Tbis_2714  extracellular solute-binding protein family 1  51.15 
 
 
414 aa  390  1e-107  Thermobispora bispora DSM 43833  Bacteria  normal  0.36636  normal 
 
 
-
 
NC_013595  Sros_3956  ABC-type sugar transport system periplasmic component-like protein  49.74 
 
 
416 aa  367  1e-100  Streptosporangium roseum DSM 43021  Bacteria  normal  0.282171  normal  0.0187852 
 
 
-
 
NC_013131  Caci_6732  extracellular solute-binding protein family 1  47.81 
 
 
425 aa  349  7e-95  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.255639  normal 
 
 
-
 
NC_012034  Athe_0399  extracellular solute-binding protein family 1  31.17 
 
 
408 aa  172  1e-41  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.00000000195685  n/a   
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  32.26 
 
 
422 aa  161  2e-38  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  30.61 
 
 
420 aa  158  2e-37  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_011884  Cyan7425_4083  extracellular solute-binding protein family 1  34.82 
 
 
417 aa  144  3e-33  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2267  extracellular solute-binding protein family 1  32.51 
 
 
445 aa  140  4.999999999999999e-32  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00064551 
 
 
-
 
NC_008698  Tpen_1152  extracellular solute-binding protein  28.66 
 
 
393 aa  123  8e-27  Thermofilum pendens Hrk 5  Archaea  normal  0.0401617  n/a   
 
 
-
 
NC_008528  OEOE_0253  ABC-type sugar transport system, periplasmic component  26 
 
 
424 aa  122  9.999999999999999e-27  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0144  extracellular solute-binding protein  30.52 
 
 
403 aa  122  1.9999999999999998e-26  Petrotoga mobilis SJ95  Bacteria  normal  0.442205  n/a   
 
 
-
 
NC_011899  Hore_00380  extracellular solute-binding protein family 1  31.23 
 
 
422 aa  120  4.9999999999999996e-26  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0751  extracellular solute-binding protein  28.82 
 
 
411 aa  119  9.999999999999999e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0314212  normal 
 
 
-
 
NC_007413  Ava_3042  extracellular solute-binding protein  30.32 
 
 
406 aa  112  1.0000000000000001e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0658677  normal 
 
 
-
 
NC_013205  Aaci_0913  extracellular solute-binding protein family 1  25.93 
 
 
421 aa  103  6e-21  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3149  extracellular solute-binding protein  25.96 
 
 
427 aa  99.8  8e-20  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2792  extracellular solute-binding protein family 1  29.03 
 
 
411 aa  96.3  1e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.199618 
 
 
-
 
NC_013947  Snas_3121  extracellular solute-binding protein family 1  35 
 
 
445 aa  94.7  2e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00116931 
 
 
-
 
NC_013946  Mrub_0630  extracellular solute-binding protein family 1  27.62 
 
 
410 aa  95.5  2e-18  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.505283 
 
 
-
 
NC_011370  Rleg2_6090  extracellular solute-binding protein family 1  25.57 
 
 
425 aa  93.6  6e-18  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2315  extracellular solute-binding protein  32.57 
 
 
455 aa  92.4  1e-17  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.271919 
 
 
-
 
NC_013595  Sros_3538  Maltose-binding periplasmic protein/domains- like protein  27.95 
 
 
406 aa  90.9  4e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  0.385239  normal 
 
 
-
 
NC_013202  Hmuk_0944  extracellular solute-binding protein family 1  26.88 
 
 
433 aa  88.6  2e-16  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.322748 
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  26.42 
 
 
424 aa  86.7  7e-16  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_009664  Krad_0385  extracellular solute-binding protein family 1  29.93 
 
 
410 aa  84.7  0.000000000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0390662 
 
 
-
 
NC_012669  Bcav_1698  extracellular solute-binding protein family 1  31.14 
 
 
447 aa  84  0.000000000000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3240  extracellular solute-binding protein  28.04 
 
 
434 aa  83.6  0.000000000000006  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013159  Svir_16660  ABC-type sugar transport system, periplasmic component  27.06 
 
 
406 aa  83.2  0.000000000000009  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.613471  normal 
 
 
-
 
NC_008243  Meso_4520  extracellular solute-binding protein  26.14 
 
 
415 aa  82.8  0.00000000000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0747  extracellular solute-binding protein  29.86 
 
 
433 aa  82.4  0.00000000000001  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00190936 
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  26.45 
 
 
415 aa  81.6  0.00000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_013131  Caci_6904  extracellular solute-binding protein family 1  28.86 
 
 
404 aa  79.7  0.00000000000009  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.000382644  hitchhiker  0.00751503 
 
 
-
 
NC_010816  BLD_1548  MalE-type ABC sugar transport system periplasmic component  27.83 
 
 
438 aa  79.7  0.00000000000009  Bifidobacterium longum DJO10A  Bacteria  unclonable  0.00000392798  n/a   
 
 
-
 
NC_009664  Krad_2164  extracellular solute-binding protein family 1  24.49 
 
 
435 aa  79.3  0.0000000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3957  extracellular solute-binding protein family 1  26.21 
 
 
432 aa  77.8  0.0000000000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  24.94 
 
 
423 aa  77  0.0000000000005  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013525  Tter_0183  extracellular solute-binding protein family 1  26.59 
 
 
429 aa  77  0.0000000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008346  Swol_0405  ABC-type sugar transport system periplasmic component-like protein  24.36 
 
 
438 aa  76.6  0.0000000000007  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3465  extracellular solute-binding protein  27.8 
 
 
411 aa  75.5  0.000000000001  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4883  ABC-type sugar transport system periplasmic component-like protein  28.63 
 
 
417 aa  75.1  0.000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.134037  normal  0.0630481 
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  27.22 
 
 
444 aa  75.5  0.000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
NC_008699  Noca_4632  extracellular solute-binding protein  27.04 
 
 
419 aa  74.3  0.000000000003  Nocardioides sp. JS614  Bacteria  normal  0.448727  n/a   
 
 
-
 
NC_013131  Caci_2611  extracellular solute-binding protein family 1  28.1 
 
 
453 aa  74.7  0.000000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.058641  normal 
 
 
-
 
NC_011899  Hore_00780  extracellular solute-binding protein family 1  25.74 
 
 
411 aa  73.9  0.000000000004  Halothermothrix orenii H 168  Bacteria  normal  0.0480859  n/a   
 
 
-
 
NC_009523  RoseRS_1359  extracellular solute-binding protein  26.96 
 
 
458 aa  74.3  0.000000000004  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0690  extracellular solute-binding protein  24.37 
 
 
402 aa  74.3  0.000000000004  Thermosipho melanesiensis BI429  Bacteria  normal  0.678935  n/a   
 
 
-
 
NC_009767  Rcas_3566  extracellular solute-binding protein  28.17 
 
 
454 aa  73.9  0.000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.42847  normal  0.297516 
 
 
-
 
NC_013946  Mrub_0045  extracellular solute-binding protein family 1  24.68 
 
 
414 aa  73.9  0.000000000005  Meiothermus ruber DSM 1279  Bacteria  normal  0.713374  normal 
 
 
-
 
NC_012669  Bcav_1680  extracellular solute-binding protein family 1  29.64 
 
 
430 aa  73.6  0.000000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.173253  normal 
 
 
-
 
NC_007413  Ava_4289  extracellular solute-binding protein  26.21 
 
 
466 aa  73.2  0.000000000008  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_1899  extracellular solute-binding protein, putative  22.51 
 
 
416 aa  72.4  0.00000000001  Bacillus cereus ATCC 10987  Bacteria  normal  0.41529  n/a   
 
 
-
 
NC_006274  BCZK1634  sugar ABC transporter, sugar-binding protein  22.51 
 
 
416 aa  72.4  0.00000000001  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0514  extracellular solute-binding protein family 1  25.99 
 
 
426 aa  72.8  0.00000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  23.9 
 
 
414 aa  72  0.00000000002  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  27.16 
 
 
407 aa  71.6  0.00000000002  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_3982  extracellular solute-binding protein family 1  23.97 
 
 
435 aa  71.2  0.00000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.71759  normal 
 
 
-
 
NC_013205  Aaci_0795  extracellular solute-binding protein family 1  23.1 
 
 
460 aa  69.7  0.0000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.215252  n/a   
 
 
-
 
NC_011831  Cagg_0729  extracellular solute-binding protein family 1  29.2 
 
 
443 aa  69.7  0.0000000001  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0000254304  normal 
 
 
-
 
NC_011366  Rleg2_5687  extracellular solute-binding protein family 1  25.66 
 
 
401 aa  68.6  0.0000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.627079  normal 
 
 
-
 
NC_012858  Rleg_6631  extracellular solute-binding protein family 1  26.1 
 
 
410 aa  68.6  0.0000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.325237 
 
 
-
 
NC_013526  Tter_2703  extracellular solute-binding protein family 1  26.03 
 
 
450 aa  67.8  0.0000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000000263225  n/a   
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  24.56 
 
 
410 aa  67.8  0.0000000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_009953  Sare_2552  extracellular solute-binding protein  23.27 
 
 
443 aa  68.2  0.0000000003  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.00000382941 
 
 
-
 
NC_011899  Hore_19770  extracellular solute-binding protein family 1  24.5 
 
 
423 aa  67.4  0.0000000004  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3339  Maltose-binding periplasmic protein/domains- like protein  27.7 
 
 
431 aa  67  0.0000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.202326 
 
 
-
 
NC_008146  Mmcs_4357  extracellular solute-binding protein  24.91 
 
 
455 aa  67  0.0000000006  Mycobacterium sp. MCS  Bacteria  normal  0.200959  n/a   
 
 
-
 
NC_008705  Mkms_4443  extracellular solute-binding protein  24.91 
 
 
455 aa  67  0.0000000006  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0226595 
 
 
-
 
NC_013172  Bfae_29010  ABC-type sugar transport system, periplasmic component  26.53 
 
 
434 aa  67  0.0000000006  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0598  extracellular solute-binding protein family 1  23.18 
 
 
446 aa  66.6  0.0000000007  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.764573  n/a   
 
 
-
 
NC_013525  Tter_0508  extracellular solute-binding protein family 1  23.95 
 
 
514 aa  67  0.0000000007  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013159  Svir_11620  ABC-type sugar transport system, periplasmic component  27.62 
 
 
426 aa  66.6  0.0000000008  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2582  extracellular solute-binding protein family 1  28.87 
 
 
416 aa  66.6  0.0000000008  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  25.94 
 
 
419 aa  66.6  0.0000000008  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_011371  Rleg2_6572  extracellular solute-binding protein family 1  25 
 
 
410 aa  66.6  0.0000000008  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00103217  normal  0.480926 
 
 
-
 
NC_013739  Cwoe_3983  extracellular solute-binding protein family 1  26.98 
 
 
456 aa  66.2  0.000000001  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0687  extracellular solute-binding protein  27.34 
 
 
407 aa  65.9  0.000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.376534  normal  0.15795 
 
 
-
 
NC_012852  Rleg_6156  extracellular solute-binding protein family 1  25.44 
 
 
410 aa  65.5  0.000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.889741  hitchhiker  0.000305646 
 
 
-
 
NC_011988  Avi_6240  ABC transporter substrate binding protein (maltose)  25.17 
 
 
407 aa  65.1  0.000000002  Agrobacterium vitis S4  Bacteria  normal  0.0994607  n/a   
 
 
-
 
NC_014165  Tbis_1886  extracellular solute-binding protein family 1  25.73 
 
 
435 aa  64.7  0.000000003  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.23125 
 
 
-
 
NC_013174  Jden_2244  extracellular solute-binding protein family 1  27.91 
 
 
455 aa  64.7  0.000000003  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.846858 
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  23.29 
 
 
427 aa  64.7  0.000000003  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0803  extracellular solute-binding protein  27.64 
 
 
433 aa  64.7  0.000000003  Salinispora tropica CNB-440  Bacteria  normal  0.437157  normal 
 
 
-
 
NC_010001  Cphy_3317  extracellular solute-binding protein  31.16 
 
 
492 aa  64.3  0.000000004  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.0000000142443  n/a   
 
 
-
 
NC_009832  Spro_2571  extracellular solute-binding protein  23.36 
 
 
417 aa  64.3  0.000000004  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3683  extracellular solute-binding protein  25.7 
 
 
432 aa  63.9  0.000000005  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  26.58 
 
 
410 aa  63.9  0.000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  26.58 
 
 
410 aa  63.9  0.000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7906  extracellular solute-binding protein family 1  25.08 
 
 
420 aa  63.9  0.000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.819994  normal 
 
 
-
 
NC_013521  Sked_27690  ABC-type sugar transport system, periplasmic component  26.12 
 
 
431 aa  63.2  0.000000008  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.340884 
 
 
-
 
NC_009077  Mjls_4737  extracellular solute-binding protein  25.19 
 
 
455 aa  63.2  0.000000008  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3712  extracellular solute-binding protein family 1  25.81 
 
 
421 aa  63.2  0.000000009  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.411366 
 
 
-
 
NC_013526  Tter_2504  extracellular solute-binding protein family 1  25.75 
 
 
442 aa  62.8  0.00000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1181  extracellular solute-binding protein  23.1 
 
 
413 aa  62.8  0.00000001  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.0000595288  n/a   
 
 
-
 
NC_013521  Sked_15060  ABC-type sugar transport system, periplasmic component  26.42 
 
 
457 aa  62.8  0.00000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.138683  normal 
 
 
-
 
NC_009664  Krad_0297  extracellular solute-binding protein family 1  29.69 
 
 
453 aa  62.8  0.00000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0248346 
 
 
-
 
NC_011725  BCB4264_A4119  putative maltosaccharide ABC transporter, maltosaccharide-binding protein  26.28 
 
 
419 aa  62.8  0.00000001  Bacillus cereus B4264  Bacteria  hitchhiker  0.000674051  n/a   
 
 
-
 
NC_010159  YpAngola_A3914  maltose ABC transporter periplasmic protein  23.75 
 
 
403 aa  62.4  0.00000002  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
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