| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3240 |
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| Symbol | |
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| ID | 6161673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3593357 |
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| End bp | 3594661 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641666014 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001792263 |
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| Protein GI | 171059914 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCC GCCGCCACAT CCTGTCCGCC GCCGCGCTGC TCGCCGCCGC CGGCGCCGCC
CACGCCGTCG ACGTCAAGTA CGTGCTGTGG GACTCGGGCC AGCGCCCGGC CTACCAGCAG
TGCGCCAGCG ACTTCGAGCG CGCCAACCCC GACATCAAGA TCAAGATCAG CCAGCAGGGC
TGGGACGAGT ACTGGACCGG CATCTCGACC GGCTTCATCT CGGGCACCGC GCCCGACGTG
TTCACCAACC ACCTGGCCAA GTACCCCGAG TTCGCCAAGA ACAACCAGCT GGTCGACCTG
GCCCCGCTGA TTGCCCGCGA CAAGGTCAAG ACCGACATCT ACGCCAACGG CCTGTTCGAC
ATCTGGGGCC GTGACGGCAA GCAGTACGGC CTGCCGAAAG ACTGGGACAC CATCGCCTTC
ATCGTCAACA TGGACGTGGC CAAGAAGGCC GGCGTGACGC TGGCCGAGTT GAACAACATG
ACGTGGAACC CGAAGGACGG CGGCACCTTC GAGCAGATCG TCAAGAAGCT GACGATCGAC
GCCAACGGCA ACAACGCGCT CAGCCCCAAG TTCGACAAGA GCAAGGTCGC CACCTACGGC
TACCAGAACC CGGGTGCCGG CGGCATGATG GGCCAGACCG AGTGGAGCCA CTTCGCGGTC
AGCAACGGCT TCAAGTTCCA GGACAAGCCC TGGGCCGGCA AGTTCTACTA CGACGACGCC
AGGCTGGCCG AGACCATCCA GTACATCGCC GGCCTGCCGG GCAAGGGCGT GTCGGCCACG
GCCGAAGACG TCAGCAAGCT GGGCTCGGGC GGCATGTTCA TGTCGGGCAA GGCAGCGATG
ATCCCCGAGG GCTCGTGGAT GATCAACCAC TTCGCCACCA ACACCAAGTT CGGCTACGCC
TGGGTGCCGC TGCCCAAGGG CCCGACCGGC GTGCGCGCCA CCATGTTCAA CGGCCTGGCC
GATTCGATCT GGGTCGGCAG CAAGAACAAG GAGCAGGCCT GGAAGTGGGT CAAGTACCTG
GGCTCCGAGG CCTGCCAGAG CGTGGTCGCC AAGGCCGGCG TGGTGTTCCC GGCCGTCAAG
GGCCTGCCGG ACACGGTGAC GGCGGTGCAC AAGGCCAAGG GCATCGACGA CTCGGCCTTC
CTCGAGATGG CCAGGGGCAA GACCTTCCTG GCGCCGATCG CCGACAACGG CTCGCAGGTC
AACGACCTGA TGCTCAACGC GATCGACTCG GTGCTGCGTG GCAAGGCCCA GGCCGCGACC
GCGTTGAAGG ACGCCAACGG CCAGGTCAAC GCACTGTTCA AGTAA
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| Protein sequence | MTIRRHILSA AALLAAAGAA HAVDVKYVLW DSGQRPAYQQ CASDFERANP DIKIKISQQG
WDEYWTGIST GFISGTAPDV FTNHLAKYPE FAKNNQLVDL APLIARDKVK TDIYANGLFD
IWGRDGKQYG LPKDWDTIAF IVNMDVAKKA GVTLAELNNM TWNPKDGGTF EQIVKKLTID
ANGNNALSPK FDKSKVATYG YQNPGAGGMM GQTEWSHFAV SNGFKFQDKP WAGKFYYDDA
RLAETIQYIA GLPGKGVSAT AEDVSKLGSG GMFMSGKAAM IPEGSWMINH FATNTKFGYA
WVPLPKGPTG VRATMFNGLA DSIWVGSKNK EQAWKWVKYL GSEACQSVVA KAGVVFPAVK
GLPDTVTAVH KAKGIDDSAF LEMARGKTFL APIADNGSQV NDLMLNAIDS VLRGKAQAAT
ALKDANGQVN ALFK
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