Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3712 |
Symbol | |
ID | 7859852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 4129844 |
End bp | 4131109 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643867815 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002883716 |
Protein GI | 229822190 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.411366 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACGTCC GCCGTCAGGC CGCCGTCGTT GCAGGCCTCG TCATCTCCAG CGTCGCTCTC GCAGCGTGCT CCGGCTCCGA TCAGGGCGGC GGGGGCACGG TCACCATCAC CTACGCGACC CCAGCCGAGG ACAACATCCT TGAGATCGGT GAGGAACCCA TCATCGAAGC CTTCGAGGCC GCACATCCCG ACATCGACGT CGAGATCGAG CAGCTCCCGT TCGCCGACTA CAACACGTCA CTGACCACAG AGATGCGCGG AGGCGGGGGC CCCGACATCG GCCGCGTCAA CCACACGGAC ATCCAGATGT ACTCAGCCGC CGGGTTCCTC CGGCCGCTCG ACGATGCGAT CGACACCGGC CCGTTCATCC CGGGGCTGGT CGAGGTGGGA CAGGTCGGCG GCGAGCAGGT GACGCTCCCG CTGACGACCG ATGCCCGCGT GCTCTACGTG AACCTCAGGC TCCTCGAGAG CGCCGGCATC TCGTCACCTC CCGCCACGTG GGACGAGCTG CTCGACGACG TCGCCGCTTT CGCGGGCACC GATGCGTACG GCTATGGGTT CCCCACCGAC AACGACTACT CGCTGGCCTA CGAGGCGGCG GGGCCGTACA TCGCGGCCGC GGGCGGACAG ATCCTGAGCC CCGACGGCGA TCCGGCCGCG TCGGGCGACG AGGCGACGGA GGCAGCGCTG CAGCTGCTCC AGGACATCGT GGCCACCGGC GCGGTCCCGC CTGGCCTCGA CAACCTGTCC GGCGACACCC TGGCTCAGCT CTTCGCACAG GACAAGCTCG CGATGATGCT CGGCGGACCC TGGGTGCGCA GCCAGATCGA GGACTACGGA GACCTGACGT ACGGCGCCGA CTGGGTGACG GTCCCTGTGC CGGCCCGGGA GGCGGGCGGA AGCTCCGGGT CCGCTGCCGG CGGGTGGCAG ATCGGGGTCT TCGAGAACTC AGAGCACCCC GAGGAGGCGC TCGAGCTCCT GGCATGGATC ACCGAGGCGG AGAACCTGCA GGCCCTGAAC GAAGGTGAGG CCTTCCCGCC CACGAACGAC GGCCTCGAGG TGGCCCCGTG GAGCGAGGAC GAGTTCTACG ACGCGTTCGC CACGGTGCTG CCCAACTCCG CCGTCCCGAT CACCCCCGTG CCCAGGGTCG CTGAGATCGC TGCGGCCTTC GAGTCGAACC TCGAGCCGGC GGTCACGAAT CCCGCCGCGT CGATCGCCGA CGGACTCTCG GCGTTCGACG CCCAGGCCGC GGAGATCCTG CAGTGA
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Protein sequence | MHVRRQAAVV AGLVISSVAL AACSGSDQGG GGTVTITYAT PAEDNILEIG EEPIIEAFEA AHPDIDVEIE QLPFADYNTS LTTEMRGGGG PDIGRVNHTD IQMYSAAGFL RPLDDAIDTG PFIPGLVEVG QVGGEQVTLP LTTDARVLYV NLRLLESAGI SSPPATWDEL LDDVAAFAGT DAYGYGFPTD NDYSLAYEAA GPYIAAAGGQ ILSPDGDPAA SGDEATEAAL QLLQDIVATG AVPPGLDNLS GDTLAQLFAQ DKLAMMLGGP WVRSQIEDYG DLTYGADWVT VPVPAREAGG SSGSAAGGWQ IGVFENSEHP EEALELLAWI TEAENLQALN EGEAFPPTND GLEVAPWSED EFYDAFATVL PNSAVPITPV PRVAEIAAAF ESNLEPAVTN PAASIADGLS AFDAQAAEIL Q
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