Gene Bcav_1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1680 
Symbol 
ID7859622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1927215 
End bp1928507 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content72% 
IMG OID643865768 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002881698 
Protein GI229820172 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2182] Maltose-binding periplasmic proteins/domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.173253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCAC GTTCCTCCCG CCTCAGCCGA CGCCAGATGC TCGCCCTCAC CGGTGGGGCA 
GCGGCCGGAC TCACCCTCAC CGCCTGCGGT ACCGGATCCG GGGGCGGCGC GGCGCCGTCG
GGCGGCTCCT CCGGTGGCGG CGGCACGCTC GAGCTCTGGG CCAACGCGGC GACAGCCGGT
GACTCCGACT CGCAGCTGCA CCAGGCCGCC GCGGCGTTCG GAGAGGCGCA CGACGTCACG
ATCAACATCC AGGGCATCCC GACCGAGGAT CTGGTGCCGA AGCTGACCAC CACGTCCAGC
GGCGGGTCCG GCCCCGACCT CGCGATCGTC GACGTCGCCT CCGTGCCACA GCTCGCTGCC
GCACAGGTGC TTGCCGACAT CACCGAGCCC AGCGCCGCCG TCGCCGACGC GTTCGGCACG
GAGCTGCTCG CGGGAGCCGG CTACGACGGC AAGCAGTTCG GCCTGCCCTA CACGACGAAC
AACGTGGCGC TCTACTACAA CGAGGACCTG CTCTCGGGCG CCGGCATCAC CGTGCCGACC
ACGTGGGACG AGCTGCGCGA GGCCGCCATC GAGCTCACGG GCGGCGAGCA GTACGGCTAC
ATGATGGGGG CGTCCGGCTT CGGGTCGTTC CTGTTCTGGC CGTGGCTGTG GCAGAACGGC
GGGTCGATCC TCACCGAGGA CCAGACCCAG GCGGCGTTCG CGGACGACCT CGGGCTCGAG
GCGTGGGAGT TCTACGCCGG TCTCGCGCTC ACGGACCAGG TCGTGCCGTC GGAGTTCATC
GCGGCCAACG CTTCCTGGGA CCAGTACGTG GCGCCGTTCG TCCAGGGCCG TGTCGCGATG
ATGGCGATCG GGCCGTGGGG CACCGCGCCG ATCACGGAGG GCAACCCGGA CCTCGCCTGG
GGCGTCGCGC CGCTGCCCGG CCAGGCCGAG AACGCGACGA CCCTCGGCGG CACCGCGATC
GGCGTCGGAT ACAACAGCCA GCAGGCCGAC CTCGCCTGGC AGTTCGCGGA GTGGGTCACG
GCGGCGGATC AGATGCCGTA CATCCAGGAG ACCGGCAACA TCCCCGCGCG GCTGGACGTC
ATCTCCTCGG ACTGGGCGGC CGAGGACCCC GATCGCCAGG TCTTCATCGA GCAGATCGCC
GTCACCCGCG CGCGCCCCGC TCTCCCGGTG TGGGGCGACA TCGAGTGGGG CGTCATGGCC
GACGCGTGGG ACTCGGTCAT CCAGGGCCAG CAGGAACCGG CCGCCGCGCT CACAGCAGCG
GCCGAGGCCG CGAACGAGAA GCTCTCCAGC TAG
 
Protein sequence
MPARSSRLSR RQMLALTGGA AAGLTLTACG TGSGGGAAPS GGSSGGGGTL ELWANAATAG 
DSDSQLHQAA AAFGEAHDVT INIQGIPTED LVPKLTTTSS GGSGPDLAIV DVASVPQLAA
AQVLADITEP SAAVADAFGT ELLAGAGYDG KQFGLPYTTN NVALYYNEDL LSGAGITVPT
TWDELREAAI ELTGGEQYGY MMGASGFGSF LFWPWLWQNG GSILTEDQTQ AAFADDLGLE
AWEFYAGLAL TDQVVPSEFI AANASWDQYV APFVQGRVAM MAIGPWGTAP ITEGNPDLAW
GVAPLPGQAE NATTLGGTAI GVGYNSQQAD LAWQFAEWVT AADQMPYIQE TGNIPARLDV
ISSDWAAEDP DRQVFIEQIA VTRARPALPV WGDIEWGVMA DAWDSVIQGQ QEPAAALTAA
AEAANEKLSS