Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1698 |
Symbol | |
ID | 7859640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1945551 |
End bp | 1946894 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643865786 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002881716 |
Protein GI | 229820190 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGG GACTGAGCCG ACGCAGGCTC CTCCAGGCCG GCACGCTCGC CGCCGCCGGC CTCGGCGCCG GCGCGCTGGC CGGCTGCGCG CCGTCCGGTG CGAGCCGGAC CACGCTGCAG CTCTGGAGCG CCTACGCGCC GGCGCCCCAG CAGGATCCGA ACATCGTCGC GCAGAGCGAC TGGTTCCTGG ACCGCCTGGC GGCGTGGAAC GCCGCCAACG ACCGGCAGAT CGAGGCGGTG TACATCCCGA ACTACGCCGA CCCGACGAAC ACCCGCATCG CGACGGCGTT CGCCTCGGGC ACCGGGCCGG ACATCTTCCT CATCTCGCCC GGCGACTTCC TCCGCTACTA CAACGGGGGC GCGCTCGTCG ACCTCGCGCC GTACATGACG CAGGAGGCCA TCGACGACTA CTTCCCGCAG GCGCTGGCCA CCCGTCGGGA CGGGGACGGG ATCTACGGCC TGCCGATGGA GCAGGAACCG CTCGCCGTCT TCTACAACAT CCCCGCGTTC GAAGAGGCGG GCCTGAGCGA GGGCGACATC CCGACCACGT GGGAGGACCT GCTGGAGCTC GGCCGCCGTC TCACGGGCGG CCAGCAGGCG GGGATGGTGT TCGAGACCAC GCCCGGCTAC TACCAGAACT TCACCTTCTA CCCCTGGATC TGGCAGGGCG GCGGCGACGT GATCGACGCC GAGACCCAGG TGCCGGACTT CACCTCGGAC GCCGCAGTCG CAGCCCTCGA GCTGTTCGGC GAAGGGGTGC GCTCGGGAGC GTCACCGCGC ACGCTCCCCG CGAACGGCGA CGTCGTCGGC GCCTTCACGA ACGGCTACGC GGCGATGTGG CAGAGCGGGA TCTGGCAGGT CGAGGCGATG CGGCAGAACG CGCCCGACCA CCCCTACGGC GTCTTCCCGC TGCCTGCGCC CGCCGGCGGG GAGCCGACCA CCGTGCTGGG CGGGTGGGCC TGGTGCGTGA ACAGCAAGGG ATCCGATCCT GAGGCCGCCG CCCGGTTCAC CGTCGAGGTG ATGGGATCGA TGTCGGCGGA GTCGATCAAC GCCGGCGCGG ACTGGAACGG ACGGTTCAAG GGGAACATCC CCGCGCGCCA GTCGGTGCTG GACGCCATCG GGGACGACGA CATCTTCGCC GACCCGATCC TCCAGAAGTT CCGGGACGAG ATCTACCCGA CCGGTCGCGG CGAGCCGCGC TACCCGCCCG TCATCTACAA GGCCGTGTCG AACGCGCTGC AGGCCGTCCA GCTCGCGGGT GCCGACGCCG CCCAGCAGGC CGAGCAGGCG CAGCGCGCGA TCGAGAGCTA CCTCGAGACC TACGACGGAG GTGACCTCCT GTGA
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Protein sequence | MAEGLSRRRL LQAGTLAAAG LGAGALAGCA PSGASRTTLQ LWSAYAPAPQ QDPNIVAQSD WFLDRLAAWN AANDRQIEAV YIPNYADPTN TRIATAFASG TGPDIFLISP GDFLRYYNGG ALVDLAPYMT QEAIDDYFPQ ALATRRDGDG IYGLPMEQEP LAVFYNIPAF EEAGLSEGDI PTTWEDLLEL GRRLTGGQQA GMVFETTPGY YQNFTFYPWI WQGGGDVIDA ETQVPDFTSD AAVAALELFG EGVRSGASPR TLPANGDVVG AFTNGYAAMW QSGIWQVEAM RQNAPDHPYG VFPLPAPAGG EPTTVLGGWA WCVNSKGSDP EAAARFTVEV MGSMSAESIN AGADWNGRFK GNIPARQSVL DAIGDDDIFA DPILQKFRDE IYPTGRGEPR YPPVIYKAVS NALQAVQLAG ADAAQQAEQA QRAIESYLET YDGGDLL
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