Gene Bcav_1698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1698 
Symbol 
ID7859640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1945551 
End bp1946894 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content71% 
IMG OID643865786 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002881716 
Protein GI229820190 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGG GACTGAGCCG ACGCAGGCTC CTCCAGGCCG GCACGCTCGC CGCCGCCGGC 
CTCGGCGCCG GCGCGCTGGC CGGCTGCGCG CCGTCCGGTG CGAGCCGGAC CACGCTGCAG
CTCTGGAGCG CCTACGCGCC GGCGCCCCAG CAGGATCCGA ACATCGTCGC GCAGAGCGAC
TGGTTCCTGG ACCGCCTGGC GGCGTGGAAC GCCGCCAACG ACCGGCAGAT CGAGGCGGTG
TACATCCCGA ACTACGCCGA CCCGACGAAC ACCCGCATCG CGACGGCGTT CGCCTCGGGC
ACCGGGCCGG ACATCTTCCT CATCTCGCCC GGCGACTTCC TCCGCTACTA CAACGGGGGC
GCGCTCGTCG ACCTCGCGCC GTACATGACG CAGGAGGCCA TCGACGACTA CTTCCCGCAG
GCGCTGGCCA CCCGTCGGGA CGGGGACGGG ATCTACGGCC TGCCGATGGA GCAGGAACCG
CTCGCCGTCT TCTACAACAT CCCCGCGTTC GAAGAGGCGG GCCTGAGCGA GGGCGACATC
CCGACCACGT GGGAGGACCT GCTGGAGCTC GGCCGCCGTC TCACGGGCGG CCAGCAGGCG
GGGATGGTGT TCGAGACCAC GCCCGGCTAC TACCAGAACT TCACCTTCTA CCCCTGGATC
TGGCAGGGCG GCGGCGACGT GATCGACGCC GAGACCCAGG TGCCGGACTT CACCTCGGAC
GCCGCAGTCG CAGCCCTCGA GCTGTTCGGC GAAGGGGTGC GCTCGGGAGC GTCACCGCGC
ACGCTCCCCG CGAACGGCGA CGTCGTCGGC GCCTTCACGA ACGGCTACGC GGCGATGTGG
CAGAGCGGGA TCTGGCAGGT CGAGGCGATG CGGCAGAACG CGCCCGACCA CCCCTACGGC
GTCTTCCCGC TGCCTGCGCC CGCCGGCGGG GAGCCGACCA CCGTGCTGGG CGGGTGGGCC
TGGTGCGTGA ACAGCAAGGG ATCCGATCCT GAGGCCGCCG CCCGGTTCAC CGTCGAGGTG
ATGGGATCGA TGTCGGCGGA GTCGATCAAC GCCGGCGCGG ACTGGAACGG ACGGTTCAAG
GGGAACATCC CCGCGCGCCA GTCGGTGCTG GACGCCATCG GGGACGACGA CATCTTCGCC
GACCCGATCC TCCAGAAGTT CCGGGACGAG ATCTACCCGA CCGGTCGCGG CGAGCCGCGC
TACCCGCCCG TCATCTACAA GGCCGTGTCG AACGCGCTGC AGGCCGTCCA GCTCGCGGGT
GCCGACGCCG CCCAGCAGGC CGAGCAGGCG CAGCGCGCGA TCGAGAGCTA CCTCGAGACC
TACGACGGAG GTGACCTCCT GTGA
 
Protein sequence
MAEGLSRRRL LQAGTLAAAG LGAGALAGCA PSGASRTTLQ LWSAYAPAPQ QDPNIVAQSD 
WFLDRLAAWN AANDRQIEAV YIPNYADPTN TRIATAFASG TGPDIFLISP GDFLRYYNGG
ALVDLAPYMT QEAIDDYFPQ ALATRRDGDG IYGLPMEQEP LAVFYNIPAF EEAGLSEGDI
PTTWEDLLEL GRRLTGGQQA GMVFETTPGY YQNFTFYPWI WQGGGDVIDA ETQVPDFTSD
AAVAALELFG EGVRSGASPR TLPANGDVVG AFTNGYAAMW QSGIWQVEAM RQNAPDHPYG
VFPLPAPAGG EPTTVLGGWA WCVNSKGSDP EAAARFTVEV MGSMSAESIN AGADWNGRFK
GNIPARQSVL DAIGDDDIFA DPILQKFRDE IYPTGRGEPR YPPVIYKAVS NALQAVQLAG
ADAAQQAEQA QRAIESYLET YDGGDLL