| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0405 |
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| Symbol | |
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| ID | 4281238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 479162 |
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| End bp | 480478 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638137293 |
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| Product | ABC-type sugar transport system periplasmic component-like protein |
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| Protein accession | YP_753114 |
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| Protein GI | 114565960 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCAAAA GTAATAAGAA GATTGTTGTT CTCATGTTAA TCTTGTCTTT GCTTATGGGT
ATCATTGCAG GTTGTGGGAC GTCTGCAGAT AAGGACGCTG CTACAGAAGT AATAACGGTT
AAGTTTTCAT ATCCTCCCTA TGGATATGAC TCCAAGTTAG AAGACCCTTT CTGGAAAAAA
TATATTGCAG CATTTGAAAA AGAAAACCCA AACATAAAAA TAGAGATGAC CGTCGAAAGC
TGGAACAACC TGTATACCAA ATGGAATCAG TATTTCGAGT CCGGTGACAC ACCTGATATC
GGGTATAATG ATGGCGCCAG AGCCGTGCAA TATGGTGTTA ATGGAAAAAT CCAGCCTATT
AATGATGTAA TAAAAGATCT GGGTGGAGAA GCAGTATTCA CACCCATTGC AGGATCATTC
AAACAAGGTG ATACTTGGTA TGCAGTGCCT AACTGTGCCG CCTCCCCCGT GCTTGCATAC
AGAAAAGACC TTCTAAAGGC TGCCGGATTT AATGAACCTC CAAAAAATTG GGATGAGCTT
GTGAGTATGT CAAAGGCCTT GACCAAAGAT GGTGTTTATG GTTTGGGCAT GTTCACTTCC
GACAGCGGCC TTACCCGCCA GATAATGATG GGATTTATGA AAGCAGCCGG AGGCAAGGTT
ATTGATGAAA AAGGCAATGT AGTTATCAAC AGCCCTGAGA ATTTGTCGGC GGTGAAATTC
ATGTCCGACC TGGTGACAGT ACACAAGGTA GTACCTCCTA GTGCCAAGGA CTGGAAATAC
GGTGATGATG TAAATGCATT GGGCGTTGGC AAAATCGCCA TGGATATTAT GTGGGGCGGT
TACGGAACTC TGTTGGCTGA AATGTTCCCT GATGTCTACC AAAACATCGG TTTCGTAAAA
ATGCCTGATG GTCCATCAGG TCATTCCGGA AGTTTCTCGG GAGCAGGGGG TTTCTTTTTA
TTTAAGAATG CCAAGCATCC TGAAGAGGCC AAAAAGTTCA TCAAATATAT GTGCAGACCT
GAAATCAGCA AGGAATGGTG CCAAATTTCC GGTAATGTAT CACCTTTCCT GTCTATTGCC
AAAGATACTG AACTCATGCA GATGGAATGG TACAAAGCAG TATCTGATCA GTCTTTTACA
GCGGTAGCTC TTGATTTCGA ATCCGGATAT ATCCCCGGCA CGGAAATACT ATATGAAGAA
AACCGTTATG CCAAGCTGGT AGTCGATGTT ATGTTAGGCA AAATGACAGC TGAGGAATCC
TTGAAGAAAT TCCACCAAGA TGCGGTAGCT GCCATAGAGA ATGCCAAAAA ACACTAG
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| Protein sequence | MSKSNKKIVV LMLILSLLMG IIAGCGTSAD KDAATEVITV KFSYPPYGYD SKLEDPFWKK
YIAAFEKENP NIKIEMTVES WNNLYTKWNQ YFESGDTPDI GYNDGARAVQ YGVNGKIQPI
NDVIKDLGGE AVFTPIAGSF KQGDTWYAVP NCAASPVLAY RKDLLKAAGF NEPPKNWDEL
VSMSKALTKD GVYGLGMFTS DSGLTRQIMM GFMKAAGGKV IDEKGNVVIN SPENLSAVKF
MSDLVTVHKV VPPSAKDWKY GDDVNALGVG KIAMDIMWGG YGTLLAEMFP DVYQNIGFVK
MPDGPSGHSG SFSGAGGFFL FKNAKHPEEA KKFIKYMCRP EISKEWCQIS GNVSPFLSIA
KDTELMQMEW YKAVSDQSFT AVALDFESGY IPGTEILYEE NRYAKLVVDV MLGKMTAEES
LKKFHQDAVA AIENAKKH
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