More than 300 homologs were found in PanDaTox collection
for query gene Krad_2164 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_2164  extracellular solute-binding protein family 1  100 
 
 
435 aa  874    Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_05090  ABC-type sugar transport system, periplasmic component  44.52 
 
 
430 aa  352  5.9999999999999994e-96  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4688  extracellular solute-binding protein family 1  45.36 
 
 
418 aa  344  2e-93  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.733472 
 
 
-
 
NC_013172  Bfae_06270  ABC-type sugar transport system, periplasmic component  38.75 
 
 
426 aa  308  2.0000000000000002e-82  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1655  extracellular solute-binding protein family 1  39.33 
 
 
425 aa  283  4.0000000000000003e-75  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.186521  normal  0.186231 
 
 
-
 
NC_003909  BCE_1899  extracellular solute-binding protein, putative  35.9 
 
 
416 aa  279  7e-74  Bacillus cereus ATCC 10987  Bacteria  normal  0.41529  n/a   
 
 
-
 
NC_006274  BCZK1634  sugar ABC transporter, sugar-binding protein  35.66 
 
 
416 aa  277  3e-73  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7906  extracellular solute-binding protein family 1  39.49 
 
 
420 aa  262  1e-68  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.819994  normal 
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  37.38 
 
 
414 aa  259  6e-68  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  30.71 
 
 
427 aa  240  2.9999999999999997e-62  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0381  extracellular solute-binding protein family 1  28.93 
 
 
421 aa  192  1e-47  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2571  extracellular solute-binding protein  29.51 
 
 
417 aa  188  2e-46  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0795  extracellular solute-binding protein family 1  27.98 
 
 
460 aa  148  1.0000000000000001e-34  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.215252  n/a   
 
 
-
 
NC_008699  Noca_4632  extracellular solute-binding protein  30.77 
 
 
419 aa  132  2.0000000000000002e-29  Nocardioides sp. JS614  Bacteria  normal  0.448727  n/a   
 
 
-
 
NC_010524  Lcho_3240  extracellular solute-binding protein  28.39 
 
 
434 aa  127  5e-28  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013235  Namu_1773  extracellular solute-binding protein family 1  27.4 
 
 
465 aa  125  1e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  0.504545  normal  0.290135 
 
 
-
 
NC_012669  Bcav_0137  extracellular solute-binding protein family 1  26.04 
 
 
453 aa  125  2e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3387  extracellular solute-binding protein  26.44 
 
 
447 aa  124  3e-27  Arthrobacter sp. FB24  Bacteria  normal  0.278202  n/a   
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  27.08 
 
 
420 aa  123  7e-27  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  26.63 
 
 
422 aa  114  4.0000000000000004e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_1750  extracellular solute-binding protein family 1  26.2 
 
 
448 aa  112  1.0000000000000001e-23  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000348272 
 
 
-
 
NC_012034  Athe_0399  extracellular solute-binding protein family 1  27.97 
 
 
408 aa  111  3e-23  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.00000000195685  n/a   
 
 
-
 
NC_013411  GYMC61_2731  extracellular solute-binding protein family 1  25.52 
 
 
454 aa  110  4.0000000000000004e-23  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_0203  extracellular solute-binding protein family 1  25.84 
 
 
441 aa  109  7.000000000000001e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.346278  normal  0.123927 
 
 
-
 
NC_013521  Sked_01900  ABC-type sugar transport system, periplasmic component  28.66 
 
 
442 aa  107  4e-22  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.867357  normal 
 
 
-
 
NC_013172  Bfae_28390  ABC-type sugar transport system, periplasmic component  27.95 
 
 
453 aa  107  5e-22  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_07450  ABC-type sugar transport system, periplasmic component  26.26 
 
 
464 aa  107  6e-22  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3149  extracellular solute-binding protein  23.96 
 
 
427 aa  105  1e-21  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12341  periplasmic sugar-binding lipoprotein uspC  28.45 
 
 
440 aa  105  2e-21  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5349  extracellular solute-binding protein family 1  28.89 
 
 
406 aa  103  5e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.535832 
 
 
-
 
NC_013205  Aaci_0913  extracellular solute-binding protein family 1  24.57 
 
 
421 aa  102  1e-20  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2819  extracellular solute-binding protein family 1  25.99 
 
 
461 aa  101  3e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.491227  normal 
 
 
-
 
NC_011831  Cagg_0729  extracellular solute-binding protein family 1  26.69 
 
 
443 aa  101  3e-20  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0000254304  normal 
 
 
-
 
NC_013525  Tter_0183  extracellular solute-binding protein family 1  27.54 
 
 
429 aa  99.4  1e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  24.26 
 
 
424 aa  99.4  1e-19  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_011831  Cagg_2267  extracellular solute-binding protein family 1  26.42 
 
 
445 aa  99.4  1e-19  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00064551 
 
 
-
 
NC_009953  Sare_2552  extracellular solute-binding protein  25 
 
 
443 aa  99.4  1e-19  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.00000382941 
 
 
-
 
NC_013739  Cwoe_3957  extracellular solute-binding protein family 1  28.61 
 
 
432 aa  96.7  8e-19  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2403  extracellular solute-binding protein  25.07 
 
 
441 aa  96.3  9e-19  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_011881  Achl_4621  extracellular solute-binding protein family 1  27.69 
 
 
413 aa  95.5  1e-18  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2218  extracellular solute-binding protein family 1  26.55 
 
 
479 aa  95.1  2e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00910899  n/a   
 
 
-
 
NC_013517  Sterm_0719  extracellular solute-binding protein family 1  26.22 
 
 
413 aa  95.1  2e-18  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.0236757  n/a   
 
 
-
 
NC_012669  Bcav_3712  extracellular solute-binding protein family 1  26.68 
 
 
421 aa  95.5  2e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.411366 
 
 
-
 
NC_013172  Bfae_29320  ABC-type sugar transport system, periplasmic component  26.94 
 
 
443 aa  94.4  3e-18  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  25.75 
 
 
504 aa  93.2  8e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  24.56 
 
 
414 aa  92.8  1e-17  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_06340  maltose-binding periplasmic protein  31.17 
 
 
409 aa  92  2e-17  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.211092  normal 
 
 
-
 
NC_014165  Tbis_1886  extracellular solute-binding protein family 1  26.7 
 
 
435 aa  90.5  6e-17  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.23125 
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  28.85 
 
 
419 aa  89.7  1e-16  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_012669  Bcav_1522  extracellular solute-binding protein family 1  27.27 
 
 
421 aa  89.4  1e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.569671  normal 
 
 
-
 
NC_009523  RoseRS_1359  extracellular solute-binding protein  27.51 
 
 
458 aa  88.6  2e-16  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  24.37 
 
 
423 aa  87.8  3e-16  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013131  Caci_4320  extracellular solute-binding protein family 1  26.35 
 
 
425 aa  87  6e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.811375  hitchhiker  0.00841489 
 
 
-
 
NC_013595  Sros_3538  Maltose-binding periplasmic protein/domains- like protein  27.95 
 
 
406 aa  85.9  0.000000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.385239  normal 
 
 
-
 
NC_009767  Rcas_3566  extracellular solute-binding protein  27.32 
 
 
454 aa  86.3  0.000000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.42847  normal  0.297516 
 
 
-
 
NC_013521  Sked_27690  ABC-type sugar transport system, periplasmic component  25.24 
 
 
431 aa  86.3  0.000000000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.340884 
 
 
-
 
NC_012848  Rleg_5048  extracellular solute-binding protein family 1  26.98 
 
 
424 aa  85.9  0.000000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.133709  normal 
 
 
-
 
NC_014158  Tpau_1639  extracellular solute-binding protein family 1  26.54 
 
 
463 aa  85.9  0.000000000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.102178  n/a   
 
 
-
 
NC_013530  Xcel_1138  extracellular solute-binding protein family 1  26.97 
 
 
423 aa  85.1  0.000000000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.443513  n/a   
 
 
-
 
NC_008025  Dgeo_0751  extracellular solute-binding protein  25.29 
 
 
411 aa  85.5  0.000000000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0314212  normal 
 
 
-
 
NC_011661  Dtur_0378  extracellular solute-binding protein family 1  25.19 
 
 
420 aa  85.1  0.000000000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4083  extracellular solute-binding protein family 1  25.5 
 
 
417 aa  84.3  0.000000000000003  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2315  extracellular solute-binding protein  27.72 
 
 
455 aa  84.3  0.000000000000003  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.271919 
 
 
-
 
NC_013521  Sked_05420  ABC-type sugar transport system, periplasmic component  26.4 
 
 
438 aa  84.7  0.000000000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0143899  normal 
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  25.34 
 
 
447 aa  84.3  0.000000000000004  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
NC_013739  Cwoe_4883  extracellular solute-binding protein family 1  26.01 
 
 
436 aa  84.3  0.000000000000004  Conexibacter woesei DSM 14684  Bacteria  normal  0.504344  normal 
 
 
-
 
NC_011661  Dtur_0437  extracellular solute-binding protein family 1  31.21 
 
 
424 aa  84  0.000000000000005  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.00000010114  n/a   
 
 
-
 
NC_014213  Mesil_3394  ABC-type sugar transport systems permease component  27.36 
 
 
411 aa  83.6  0.000000000000006  Meiothermus silvanus DSM 9946  Bacteria  normal  0.498756  normal  0.24931 
 
 
-
 
NC_013131  Caci_2108  extracellular solute-binding protein family 1  27.24 
 
 
430 aa  83.6  0.000000000000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.553068 
 
 
-
 
NC_012669  Bcav_0919  extracellular solute-binding protein family 1  30.08 
 
 
441 aa  83.2  0.000000000000008  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  25.99 
 
 
461 aa  82.4  0.00000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_013526  Tter_2504  extracellular solute-binding protein family 1  24.92 
 
 
442 aa  82  0.00000000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2524  extracellular solute-binding protein family 1  26.39 
 
 
483 aa  82  0.00000000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  decreased coverage  0.00000000331289  n/a   
 
 
-
 
NC_011368  Rleg2_5331  extracellular solute-binding protein family 1  26.67 
 
 
424 aa  82  0.00000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7695  ABC-type sugar transport system periplasmic component-like protein  26.06 
 
 
435 aa  81.3  0.00000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.397837  normal  0.53163 
 
 
-
 
NC_011899  Hore_00780  extracellular solute-binding protein family 1  22.99 
 
 
411 aa  81.6  0.00000000000003  Halothermothrix orenii H 168  Bacteria  normal  0.0480859  n/a   
 
 
-
 
NC_011661  Dtur_0375  extracellular solute-binding protein family 1  24.94 
 
 
421 aa  80.9  0.00000000000004  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3329  extracellular solute-binding protein  30.65 
 
 
431 aa  80.5  0.00000000000006  Arthrobacter sp. FB24  Bacteria  normal  0.0332045  n/a   
 
 
-
 
NC_013739  Cwoe_3983  extracellular solute-binding protein family 1  25.85 
 
 
456 aa  80.1  0.00000000000006  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2818  extracellular solute-binding protein  26.2 
 
 
488 aa  79.7  0.00000000000008  Roseiflexus sp. RS-1  Bacteria  normal  0.179577  normal 
 
 
-
 
NC_013526  Tter_2474  extracellular solute-binding protein family 1  22.86 
 
 
484 aa  80.1  0.00000000000008  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000108946  n/a   
 
 
-
 
NC_008541  Arth_3465  extracellular solute-binding protein  26.67 
 
 
411 aa  79.3  0.0000000000001  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3956  ABC-type sugar transport system periplasmic component-like protein  25.2 
 
 
416 aa  79.7  0.0000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.282171  normal  0.0187852 
 
 
-
 
NC_011886  Achl_3119  extracellular solute-binding protein family 1  24.63 
 
 
428 aa  79.3  0.0000000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009767  Rcas_2546  extracellular solute-binding protein  26.62 
 
 
488 aa  79  0.0000000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.39868  normal  0.139719 
 
 
-
 
NC_012850  Rleg_4344  extracellular solute-binding protein family 1  27.13 
 
 
428 aa  79  0.0000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0302279  hitchhiker  0.00000351134 
 
 
-
 
NC_012669  Bcav_1534  extracellular solute-binding protein family 1  26.09 
 
 
436 aa  78.6  0.0000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.191711  decreased coverage  0.00957964 
 
 
-
 
NC_011886  Achl_3131  extracellular solute-binding protein family 1  30.58 
 
 
422 aa  77.8  0.0000000000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00803878 
 
 
-
 
NC_013172  Bfae_29010  ABC-type sugar transport system, periplasmic component  30.24 
 
 
434 aa  77.8  0.0000000000003  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  23.64 
 
 
410 aa  78.2  0.0000000000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_014165  Tbis_2714  extracellular solute-binding protein family 1  26.1 
 
 
414 aa  77.8  0.0000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  0.36636  normal 
 
 
-
 
NC_010003  Pmob_0144  extracellular solute-binding protein  23.37 
 
 
403 aa  77.8  0.0000000000003  Petrotoga mobilis SJ95  Bacteria  normal  0.442205  n/a   
 
 
-
 
NC_013131  Caci_4697  extracellular solute-binding protein family 1  27.87 
 
 
442 aa  77.4  0.0000000000005  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00367387  normal 
 
 
-
 
NC_013172  Bfae_01550  ABC-type sugar transport system, periplasmic component  28.15 
 
 
438 aa  77.4  0.0000000000005  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4993  extracellular solute-binding protein family 1  28.73 
 
 
432 aa  77.4  0.0000000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0450999  normal  0.012477 
 
 
-
 
NC_013526  Tter_2513  extracellular solute-binding protein family 1  25.42 
 
 
441 aa  77.4  0.0000000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0626  extracellular solute-binding protein  25.15 
 
 
408 aa  77  0.0000000000005  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000892518  n/a   
 
 
-
 
NC_009953  Sare_0747  extracellular solute-binding protein  26.4 
 
 
433 aa  77.4  0.0000000000005  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00190936 
 
 
-
 
NC_007413  Ava_3042  extracellular solute-binding protein  24.24 
 
 
406 aa  76.6  0.0000000000007  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0658677  normal 
 
 
-
 
NC_014212  Mesil_2792  extracellular solute-binding protein family 1  23.29 
 
 
411 aa  76.6  0.0000000000008  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.199618 
 
 
-
 
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