Gene Bcav_1655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1655 
Symbol 
ID7859597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1897179 
End bp1898456 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content70% 
IMG OID643865743 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002881673 
Protein GI229820147 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.186521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.186231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGCC GCACGTTCCT CGGTGCCGCG GCCCTGGCGC CGCTGGGCGC CGCCGTCGCC 
GCCTGCTCCG ACCCGCCGGA CGGGGGAGAG CGGCCGGCCG GCCGCGCCCG GATCTCCTAC
GGCATGTGGG ACCAGCTCCA GGTGCCCGCC ATGCAGGAGG TCATCGACGC GTTCAACGTC
GAGCACCCCG ACATCGAGGT GACGATCCAG CTCACCCCGT TCAGCACGTA CTGGACCCGG
CTGCAGACGT CCATCACGGG CGGGGGAGCG GCCGACGTCT TCTGGATGAA CGGCCCAAGC
ATCCGGAAGT TCGCGCACTA CGGCACGCTC CTCCCGCTCG GTGAGCGGCT GGCGGCCGAC
GGCGTCGACC TCGCCGCCGA CCACCCCGCG AACCTCGTGG ACCTGTACGC CTACGACGGC
GAGCAGTACG GGGTCCCGAA GGACTACGAC TGCATCTCGC TCTACTACAA CAAGGCGCTC
TTCGACGAGA TGGGCGTCCC GTACCCCGAT GCCACGTGGA CCTGGGACAC CGTGCGCGAC
GCCGTGGCCG AGTTCCGCGA CCCCGCGCGC GGACGCTACG GCATCAGCTC GGCGATCGAC
CGGCAGCGCA ACCTCTACCC CCTCGTGTTC CAGAACGGGG GAGAGGTGAT CGACGGCGGT
CGGTCGGGGT TCGACTCCGA GGCCACGATC GGCGGCCTGG AGTTCTGGAC GGACCTCGTC
AACGACGGCC TCGCCCCGAA CGCCATGGCC ACCGCCGACA CGCAGGGCCG CTCCCTCTTC
CTCGGCGGCC AGATCGCCAT GTACTACGGG CTGCCGAACG ACGCCGTCGA GGCGTACGAC
GACCCCGCGA TCCGGGAGCG CACGGACATC GCCGTCCTCC CGGCCGGGAC CGAGCGCGGC
AACGTCATCC ACGGGCTCGC CAACGTCGTC AACGCCCGCA CGGCCTTCCC CGACGCCGCC
TACGAGCTCG TGAAGTTCAT GGCGGGTCGC GAGGCGGGTG AGATCCAGGG CGCGAGCGGG
TCCATCCTGC CGAGCTTCGC CGGCACGGAG GCGGCGTACC TGGCGTCGAA GCCCGAGTTC
AACCTGCAGG CGTTCATCGA CCAGATCCCC GACTGCACGG CCTACCCCGT GTCCATGAAC
ACGAACACCT GGGAGAACAT GCAGTACACC TACCTCGCCC CCGCCTGGAT CGGCGACCCG
TCCCGGTCCG TCGCCGACGC CTCGCGGCGG CTCGCGACCG AGATGAACCG GGTGCTCGAC
GCGGAGCCGG CCACGTGA
 
Protein sequence
MRRRTFLGAA ALAPLGAAVA ACSDPPDGGE RPAGRARISY GMWDQLQVPA MQEVIDAFNV 
EHPDIEVTIQ LTPFSTYWTR LQTSITGGGA ADVFWMNGPS IRKFAHYGTL LPLGERLAAD
GVDLAADHPA NLVDLYAYDG EQYGVPKDYD CISLYYNKAL FDEMGVPYPD ATWTWDTVRD
AVAEFRDPAR GRYGISSAID RQRNLYPLVF QNGGEVIDGG RSGFDSEATI GGLEFWTDLV
NDGLAPNAMA TADTQGRSLF LGGQIAMYYG LPNDAVEAYD DPAIRERTDI AVLPAGTERG
NVIHGLANVV NARTAFPDAA YELVKFMAGR EAGEIQGASG SILPSFAGTE AAYLASKPEF
NLQAFIDQIP DCTAYPVSMN TNTWENMQYT YLAPAWIGDP SRSVADASRR LATEMNRVLD
AEPAT