Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_12341 |
Symbol | |
ID | 5223018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 2601306 |
End bp | 2602628 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640607098 |
Product | periplasmic sugar-binding lipoprotein uspC |
Protein accession | YP_001288272 |
Protein GI | 148823518 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 370 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 239 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCGGC CCCGCCAGTC CACGCTGGTC GCCACCGCCC TTGTGCTGGT GGCGATCCTG CTGGGTGTGA CGGCGGTGCT ATTGGGGCTC TCCGCCGAAC CGCGTGGCGG AAAGATCGTC GTAACGGTGC GACTCTGGGA CGAGCCGATT GCTGCGGCGT ATCGACAGTC GTTTGCGGCA TTCACCCGCA GCCATCCCGA TATCGAGGTG CGCACCAATC TGGTGGCCTA TTCGACCTAC TTCGAAACCC TGCGCACCGA CGTGGCTGGC GGCAGCGCGG ACGACATCTT CTGGCTATCC AACGCCTACT TCGCCGCCTA CGCTGACAGT GGCCGGCTAA TGAAGATTCA GACCGATGCC GCCGACTGGG AGCCGGCGGT GGTTGACCAG TTCACTCGGT CCGGCGTCTT GTGGGGTGTG CCGCAACTGA CGGACGCCGG AATTGCCGTG TTCTACAACG CCGATCTGCT GGCTGCCGCC GGTGTCGACC CCACGCAGGT GGACAACTTG CGATGGAGTC GCGGCGATGA CGACACCTTG CGCCCGATGC TGGCTAGGCT CACCGTCGAC GCCGATGGAC GCACCGCCAA CACGCCAGGA TTCGATGCTC GGCGGGTCCG CCAGTGGGGA TACAACGCCG CCAACGATCC TCAGGCCATC TACCTTAACT ACATCGGCTC GGCCGGCGGT GTGTTCCAGC GCGACGGCAA GTTCGCGTTC GATAACCCCG GCGCCATCGA AGCCTTCCGC TATCTGGTCG GCCTGATCAA CGACGACCAC GTCGCACCGC CGGCCTCGGA CACCAACGAC AACGGCGATT TCTCCCGTAA CCAGTTTCTG GCTGGCAAGA TGGCGCTATT CCAGTCCGGC ACCTACAGTT TGGCGCCGGT AGCCCGTGAC GCCCTCTTCC ACTGGGGTGT GGCGATGCTT CCCGCCGGCC CCGCAGGCCG GGTAAGCGTC ACCAATGGTA TTGCTGCAGC TGGTAATTCG GCGTCCAAAC ATCCGGATGC GGTGCGTCAG GTGCTGGCCT GGATGGGCAG CACGGAGGGC AACTCCTACC TGGGCCGCCA CGGTGCGGCC ATCCCCGCGG TGTTGTCTGC GCAACCGGTC TACTTCGACT ACTGGTCTGC TAGGGGCGTC GATGTCACGC CGTTCTTCGC GGTGTTGAAC GGTCCGCGCA TTGCGGCCCC CGGCGGCGCC GGCTTCGCCG CCGGACAGCA GGCCCTCGAA CCCTACTTCG ACGAAATGTT CCTCGGCCGT GGCGATGTCA CGACAACCCT GAGGCAGGCA CAGGCGGCGG CCAATGCTGC CACACAGCGC TAG
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Protein sequence | MTRPRQSTLV ATALVLVAIL LGVTAVLLGL SAEPRGGKIV VTVRLWDEPI AAAYRQSFAA FTRSHPDIEV RTNLVAYSTY FETLRTDVAG GSADDIFWLS NAYFAAYADS GRLMKIQTDA ADWEPAVVDQ FTRSGVLWGV PQLTDAGIAV FYNADLLAAA GVDPTQVDNL RWSRGDDDTL RPMLARLTVD ADGRTANTPG FDARRVRQWG YNAANDPQAI YLNYIGSAGG VFQRDGKFAF DNPGAIEAFR YLVGLINDDH VAPPASDTND NGDFSRNQFL AGKMALFQSG TYSLAPVARD ALFHWGVAML PAGPAGRVSV TNGIAAAGNS ASKHPDAVRQ VLAWMGSTEG NSYLGRHGAA IPAVLSAQPV YFDYWSARGV DVTPFFAVLN GPRIAAPGGA GFAAGQQALE PYFDEMFLGR GDVTTTLRQA QAAANAATQR
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