Gene Sros_7695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7695 
Symbol 
ID8671017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8495084 
End bp8496391 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content67% 
IMG OID 
ProductABC-type sugar transport system periplasmic component-like protein 
Protein accessionYP_003343109 
Protein GI271968913 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.397837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.53163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTTTCC CCATCTCCAA AAAAGCCCTG GCCGCAGCGG CCCTGGCCCT GACCGCCACC 
GTCACCGCCG CGTGCAGCGG CAGCGGCGGC GGCACGACCA GCGGCGGCGC GTCCGCCGGC
GGAAAGGTCA CCATCCGGTG GTCGACCTGG GGCTCGGCCG AGGACGTCGC GCTCTACAAG
GGCTTCAACG ACGACTTCAT GAAGCGCCAC CCGAACATCG TGCTGAAGAT GGAGACGGTC
CCCAAGTACG AGGAGTACCA CCCCAAGCTC CTCACCCAGC TCACCTCCAA GACCGCGCCC
GACGTCTTCT TCGTCGGAGA CGACAACGTC GGCAAGTTCG TCGCCGCCGG GGTGCTCGCC
CCGCTCAACG ACAAGCTCGC CGGCCCGGAC AGCAAGAGCA AGCCCGAGGA CTACTTCGAG
GGCATCTACG GCGGGGCCAA GAAGGACGGC CAGATCTACG GCATCCCGAA CGACACCAGC
CCCGAGGTCC TCTGGTACGG CAAGAAGGCG CTCAAGGAGG CCGGGATCAC CGAGGACCCG
GCCGAGCTGA ACGCGGCCGG CAAGTGGACC ATGGCCAAAT ACCTGGAGAT GAACGCCAAG
CTCAAGGCCG CGGGCAAGGC CGGCTCCCTC TTCTGGAACT GGTACGGCTC GACCTACAGC
ATGATCGGCG GCTTCGGCGG CAAGGTCTGG GACGGCGGCA AGTTCGTCGC CACCACCGAC
CCCAAGTCCC GTAAGGCCCT GGAGACCCTC GCCAAGGGGT ACGCGGACAA GACCTTCCTG
TCGGTCGACG TGCTGCCCGC CAGCAACGGC GCCAACACCC AGTTCCTGCG GGGCAAGGCC
GGCTTCTACG CCGGCGGCCG GTGGGTGATC GACGTGGTCA AGAAGGGCGG CGACCTGCCC
AACTACGACA TCGTGCCGTT CCCGTCGGAG ACCGGCCAGC CGATGCCCGG CGCGGTCGCG
GCCTCCTACC TCGCGCTGAA CAAGGACTCC AAGAACGCCA AGGAGGCCTT CACCTTCCTG
ACCGAGTTCG TCAGCAAGGA GGGGCAGCTC CAGCGGCTCA AGGGCGGCGG CGCGGTCCCC
TCGGTCAAGG GCGCCGAGCA GATCGTGCTG GAGGACAACT ACCCGGCGCA CGCCCAGACG
CTCCTGGACG TCCGTGACAC CGGCTTCGCC AACTACCCCG AGGAGGTCGC CGTGCCGGGT
CTCACCAAGG ACATCAACGA CCACCTGCTG AAGGTCTGGA CCGGCAAGGT CGCCTTCGAG
CAGGGCATGA CCGAGCTCCA GGCCATCGTC GACGGCAAGA TCGGTTAG
 
Protein sequence
MSFPISKKAL AAAALALTAT VTAACSGSGG GTTSGGASAG GKVTIRWSTW GSAEDVALYK 
GFNDDFMKRH PNIVLKMETV PKYEEYHPKL LTQLTSKTAP DVFFVGDDNV GKFVAAGVLA
PLNDKLAGPD SKSKPEDYFE GIYGGAKKDG QIYGIPNDTS PEVLWYGKKA LKEAGITEDP
AELNAAGKWT MAKYLEMNAK LKAAGKAGSL FWNWYGSTYS MIGGFGGKVW DGGKFVATTD
PKSRKALETL AKGYADKTFL SVDVLPASNG ANTQFLRGKA GFYAGGRWVI DVVKKGGDLP
NYDIVPFPSE TGQPMPGAVA ASYLALNKDS KNAKEAFTFL TEFVSKEGQL QRLKGGGAVP
SVKGAEQIVL EDNYPAHAQT LLDVRDTGFA NYPEEVAVPG LTKDINDHLL KVWTGKVAFE
QGMTELQAIV DGKIG