| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0919 |
|---|
| Symbol | |
|---|
| ID | 7858140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 1031381 |
|---|
| End bp | 1032706 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643865002 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_002880942 |
|---|
| Protein GI | 229819416 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACA CCCGACGAGT TGGTCGCTCG ACGACAGCCG CCTTCGCGGC GATCGCCGTG
AGCGCTGCGC TCGCGGCTTG CGGAGGGACC GCTCCCGAAG CCGCCCCGAC AGTCGGGCCC
GTGCCCGATG CGGAACTGCG CATCGTCTGG TGGGGGGCGG AGGACCGGGC CGACGCGATC
AACGCGGCGC TCGACGTGGT CACCGAGCGG GAGCCCGGCC TGACGTTCGT CAGCGAGTAC
AGCGGCTTCG ACGGCTACTT CCCGAAGCTC ACGACGCAGA TCGCCGGCGG CAATGCCCCC
GACATCGCTG CCGTGAACTT CGTCCCGGAA CGCGTGGACT ACGCGCAACG GGGCGCACTC
CTGGACCTGA CTCCGTACGT CGAGTCCGGG GCGCTGGATC TGTCCGGCTA CGACGACGCG
ACGATCGACT ACGGCCGCAC CGGTGACGGG CTCTACGGCT TGCCAACCTC GATCTCGACC
CAGGCGGTGC TCGTCAACAC AGATGTCTTC GACGAATATG GGCTCGAGGT ACCCGCGGAC
GACTGGACGT GGGACGAGTT CATCGCGTTG AGCAACGGGG TCACCGAGGC GACAGGCGGG
GCCGTCCATG GCACGGAAGA CGTCTCCGCG CTTCACTGGG TGTACGAGAC CTGGTACTTC
GGCAAGACGG GGGATCTCAT CTACGAGGAC GACTCGGGCG CCCGCACCGA CGACGTCGAG
GATGTCACCG AGTGGTTCGA GATGTGGGCC GATCTGCGTG AGAGCGGCGG AACCGTCCCC
GCTGACGTCC AGGCAGCACA CACGATCGGC GACTACCCGA CGAGCCCGCT GGTGACGGGC
GATGCGGCGA TGAGCTTCCA GTTCACCTCC GCGGCATCCA GCTTCCGCCC ACTGTCGCCG
AGCCCGCTCG CCCTCGTCGC GCAGCCGTCC GCCGGCGACA ACCCGCACCA GTACATCCGC
CCGTCGACGA TGTGGGCGAT CACCGCTGAC ACCGCTCACC CGGACAGCGC GGTCGCGGCA
GTGAACGTCC TCGTCAACGA CGAGGACGCG CTCCTCGCCG TCGGGCTCAG CACAGGCATG
CCTGCGTCGG CGAGGGCGCG GGAGGTGCTC GAGCCGACGC TCGCCCCGGA GGACGCCGAG
GTCATCGACT TCGTGAGCCG CATCTCGGAG CTGCCGACGA CCGCGGCGCC GTCCATCGTC
CCCGGCGGTG CCCGTGACGT CGAGGACCTC TTCATCCGCA TCGCTCAGGA GGTTTCGTTC
GGGCAGCTCA CGCCGGCGGA AGGCGCTCAG GCGTTCTTCG ACGAGGCTGA GGGGCTCCTC
GGCTGA
|
|---|
| Protein sequence | MNDTRRVGRS TTAAFAAIAV SAALAACGGT APEAAPTVGP VPDAELRIVW WGAEDRADAI
NAALDVVTER EPGLTFVSEY SGFDGYFPKL TTQIAGGNAP DIAAVNFVPE RVDYAQRGAL
LDLTPYVESG ALDLSGYDDA TIDYGRTGDG LYGLPTSIST QAVLVNTDVF DEYGLEVPAD
DWTWDEFIAL SNGVTEATGG AVHGTEDVSA LHWVYETWYF GKTGDLIYED DSGARTDDVE
DVTEWFEMWA DLRESGGTVP ADVQAAHTIG DYPTSPLVTG DAAMSFQFTS AASSFRPLSP
SPLALVAQPS AGDNPHQYIR PSTMWAITAD TAHPDSAVAA VNVLVNDEDA LLAVGLSTGM
PASARAREVL EPTLAPEDAE VIDFVSRISE LPTTAAPSIV PGGARDVEDL FIRIAQEVSF
GQLTPAEGAQ AFFDEAEGLL G
|
|---|
| |