Gene Rleg2_5349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5349 
Symbol 
ID6978443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp974497 
End bp975717 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content61% 
IMG OID643394451 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002279269 
Protein GI209547351 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.535832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTTC TGAAGAAAGC GCTTTTGCTC GCCACAATCG GCGGCAGTCT TTTTGCCACA 
GCCGCATCGG CCGAACAGGT CAATCTGACC TGGCAGATGT GGACCGGTTC CGATGCCGAC
ACCAAGGGCT GGCAGCACCT GGCCGACATG GTCACCGCCA AGTACCCCGA TATCAAGGTG
GCGCTGACGA CGACCGGCTG GGTCGACTAC TGGACGAGGC TGCCGGTGCT GGCGGCGTCG
GGCCAGCTTG CCGACATCGT TTCCATGCAG TCGCTGCGCA TGCCGAATTT CTATTCGCTG
CTCGAGCCCC TGAATGACCG GATCGCCGCC GACAAATTCG ATGTCGGCGC TTTCACCCCC
TCGATCATCG GCGGCATGTC CGTTGACAAG CAGCTCTATG GCCTGCCTTA CGACGTCGGT
CCGTGGGTCA TCTATTATAA CCAGGACGCG CTCGAAGCCG CCGGCGTTCC GCTGCCGAAG
CCGGGCTGGA CGCTTGCCGA ATTCACCGAT GCTGCCAAGA AGCTGACCAA GGACGGCAAA
TACGGCTTCG GCATCACCCC GCAGAACTAT TCGGTCCTGG CGGCTGCCTG GGGCGATAAA
TATGTCAATG ATGCAGGAGA GCTCGACCTC ACCAATCCGA GCGCCATAGC TGCGGCAGAG
AGGGTGATCG GCTTTGCCGC CAAGGATAAG GTAGCGCCGC TGGTGCCGTC GAGCGCCGAT
GCCGGCACGG TCATCCAAGG CCGGTTCTAT TCGGGCAATG TCGCCATGTA TGTCGACGGT
CCATGGTCGA TCATCGGCAT GAAGGACAAG GTCAAGTTCA AGATTGGTTC CACTTCCCTG
CCGCGCGGGG ACAGTGAGCT TACCGCCGTC ACGGCGGGCT CGGGTTTCGG CATCGCCACG
ACGAGCAAGA ACAAGGATGC GGCCTGGAAG GCGATCCAGG TGCTGACCAG CCCGGAGGCG
CTGCAGTATC TCGCCGAACA GGGACGTGCG CTGCCGGCGC GCACGGCGTC GCAATCCTCC
TGGTACAAAG TCGCAGCCAA GGACATCACC AATGGCGGCG AGGCTATCGA CTATTCTCTG
GCGCATTCCG TGCCCTACGT GATCACCAAC AACTGGGCGG CGGTCGAAAA CCTGTTCAAC
CAGTATTTCC CGCCGGCCTT CGGCGGCAGC GCCGACGCCA AGCAGACGAT GGAGTCGATC
CAGAGCCTCG CGCAGCAATA A
 
Protein sequence
MKVLKKALLL ATIGGSLFAT AASAEQVNLT WQMWTGSDAD TKGWQHLADM VTAKYPDIKV 
ALTTTGWVDY WTRLPVLAAS GQLADIVSMQ SLRMPNFYSL LEPLNDRIAA DKFDVGAFTP
SIIGGMSVDK QLYGLPYDVG PWVIYYNQDA LEAAGVPLPK PGWTLAEFTD AAKKLTKDGK
YGFGITPQNY SVLAAAWGDK YVNDAGELDL TNPSAIAAAE RVIGFAAKDK VAPLVPSSAD
AGTVIQGRFY SGNVAMYVDG PWSIIGMKDK VKFKIGSTSL PRGDSELTAV TAGSGFGIAT
TSKNKDAAWK AIQVLTSPEA LQYLAEQGRA LPARTASQSS WYKVAAKDIT NGGEAIDYSL
AHSVPYVITN NWAAVENLFN QYFPPAFGGS ADAKQTMESI QSLAQQ