More than 300 homologs were found in PanDaTox collection
for query gene CPR_0476 on replicon NC_008262
Organism: Clostridium perfringens SM101



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  100 
 
 
427 aa  879    Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1899  extracellular solute-binding protein, putative  42.36 
 
 
416 aa  337  2.9999999999999997e-91  Bacillus cereus ATCC 10987  Bacteria  normal  0.41529  n/a   
 
 
-
 
NC_006274  BCZK1634  sugar ABC transporter, sugar-binding protein  42.36 
 
 
416 aa  337  2.9999999999999997e-91  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4688  extracellular solute-binding protein family 1  39.64 
 
 
418 aa  314  1.9999999999999998e-84  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.733472 
 
 
-
 
NC_013131  Caci_7906  extracellular solute-binding protein family 1  38.04 
 
 
420 aa  302  8.000000000000001e-81  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.819994  normal 
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  34.76 
 
 
414 aa  269  7e-71  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_012669  Bcav_1655  extracellular solute-binding protein family 1  31.5 
 
 
425 aa  259  6e-68  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.186521  normal  0.186231 
 
 
-
 
NC_013172  Bfae_06270  ABC-type sugar transport system, periplasmic component  33.49 
 
 
426 aa  251  1e-65  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2164  extracellular solute-binding protein family 1  30.71 
 
 
435 aa  240  2.9999999999999997e-62  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2571  extracellular solute-binding protein  32.49 
 
 
417 aa  234  2.0000000000000002e-60  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_05090  ABC-type sugar transport system, periplasmic component  29.95 
 
 
430 aa  201  1.9999999999999998e-50  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0381  extracellular solute-binding protein family 1  30.98 
 
 
421 aa  187  3e-46  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0795  extracellular solute-binding protein family 1  30.73 
 
 
460 aa  176  9.999999999999999e-43  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.215252  n/a   
 
 
-
 
NC_013411  GYMC61_2731  extracellular solute-binding protein family 1  30.17 
 
 
454 aa  169  9e-41  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010524  Lcho_3240  extracellular solute-binding protein  30.52 
 
 
434 aa  152  1e-35  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008699  Noca_4632  extracellular solute-binding protein  31.52 
 
 
419 aa  150  4e-35  Nocardioides sp. JS614  Bacteria  normal  0.448727  n/a   
 
 
-
 
NC_013517  Sterm_0719  extracellular solute-binding protein family 1  30.65 
 
 
413 aa  149  1.0000000000000001e-34  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.0236757  n/a   
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  29.97 
 
 
422 aa  148  2.0000000000000003e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_2819  extracellular solute-binding protein family 1  29.01 
 
 
461 aa  146  6e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.491227  normal 
 
 
-
 
NC_013526  Tter_2504  extracellular solute-binding protein family 1  27.2 
 
 
442 aa  145  2e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3387  extracellular solute-binding protein  29.15 
 
 
447 aa  144  2e-33  Arthrobacter sp. FB24  Bacteria  normal  0.278202  n/a   
 
 
-
 
NC_011661  Dtur_0378  extracellular solute-binding protein family 1  28.04 
 
 
420 aa  139  1e-31  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_01900  ABC-type sugar transport system, periplasmic component  27.36 
 
 
442 aa  137  3.0000000000000003e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.867357  normal 
 
 
-
 
NC_012669  Bcav_0137  extracellular solute-binding protein family 1  28.14 
 
 
453 aa  137  3.0000000000000003e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  29.87 
 
 
420 aa  137  3.0000000000000003e-31  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_011661  Dtur_0375  extracellular solute-binding protein family 1  28.14 
 
 
421 aa  137  5e-31  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2818  extracellular solute-binding protein  35.23 
 
 
488 aa  136  6.0000000000000005e-31  Roseiflexus sp. RS-1  Bacteria  normal  0.179577  normal 
 
 
-
 
NC_009767  Rcas_2546  extracellular solute-binding protein  34.11 
 
 
488 aa  136  7.000000000000001e-31  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.39868  normal  0.139719 
 
 
-
 
NC_013526  Tter_2315  extracellular solute-binding protein family 1  27.27 
 
 
503 aa  135  9.999999999999999e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  28.74 
 
 
447 aa  134  3e-30  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
NC_011881  Achl_4621  extracellular solute-binding protein family 1  31.27 
 
 
413 aa  134  3.9999999999999996e-30  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010001  Cphy_0592  extracellular solute-binding protein  27.97 
 
 
456 aa  134  3.9999999999999996e-30  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000165278  n/a   
 
 
-
 
NC_011886  Achl_1750  extracellular solute-binding protein family 1  27.05 
 
 
448 aa  132  7.999999999999999e-30  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000348272 
 
 
-
 
NC_013526  Tter_2524  extracellular solute-binding protein family 1  29.73 
 
 
483 aa  132  9e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  decreased coverage  0.00000000331289  n/a   
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  27.95 
 
 
424 aa  131  2.0000000000000002e-29  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_011831  Cagg_2267  extracellular solute-binding protein family 1  29.23 
 
 
445 aa  129  8.000000000000001e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00064551 
 
 
-
 
NC_010003  Pmob_0954  extracellular solute-binding protein  25.26 
 
 
399 aa  126  9e-28  Petrotoga mobilis SJ95  Bacteria  normal  0.0450213  n/a   
 
 
-
 
NC_009523  RoseRS_3149  extracellular solute-binding protein  24.01 
 
 
427 aa  125  2e-27  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_1773  extracellular solute-binding protein family 1  30.17 
 
 
465 aa  124  3e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  0.504545  normal  0.290135 
 
 
-
 
NC_013521  Sked_27690  ABC-type sugar transport system, periplasmic component  29.58 
 
 
431 aa  122  9.999999999999999e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.340884 
 
 
-
 
NC_013172  Bfae_07450  ABC-type sugar transport system, periplasmic component  27.41 
 
 
464 aa  121  1.9999999999999998e-26  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  28 
 
 
410 aa  120  4.9999999999999996e-26  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_012034  Athe_0399  extracellular solute-binding protein family 1  29.11 
 
 
408 aa  120  4.9999999999999996e-26  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.00000000195685  n/a   
 
 
-
 
NC_013525  Tter_0183  extracellular solute-binding protein family 1  28.83 
 
 
429 aa  120  4.9999999999999996e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_0729  extracellular solute-binding protein family 1  25.64 
 
 
443 aa  119  7e-26  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0000254304  normal 
 
 
-
 
NC_008541  Arth_3329  extracellular solute-binding protein  31.71 
 
 
431 aa  118  1.9999999999999998e-25  Arthrobacter sp. FB24  Bacteria  normal  0.0332045  n/a   
 
 
-
 
NC_013739  Cwoe_3957  extracellular solute-binding protein family 1  27.27 
 
 
432 aa  118  1.9999999999999998e-25  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2513  extracellular solute-binding protein family 1  29.93 
 
 
441 aa  115  1.0000000000000001e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0437  extracellular solute-binding protein family 1  27.25 
 
 
424 aa  115  2.0000000000000002e-24  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.00000010114  n/a   
 
 
-
 
NC_011886  Achl_3131  extracellular solute-binding protein family 1  30.22 
 
 
422 aa  114  3e-24  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00803878 
 
 
-
 
NC_014158  Tpau_1639  extracellular solute-binding protein family 1  26.09 
 
 
463 aa  114  4.0000000000000004e-24  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.102178  n/a   
 
 
-
 
NC_012034  Athe_2310  extracellular solute-binding protein family 1  26.9 
 
 
425 aa  112  1.0000000000000001e-23  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.00000000523246  n/a   
 
 
-
 
NC_013172  Bfae_29320  ABC-type sugar transport system, periplasmic component  26.48 
 
 
443 aa  112  1.0000000000000001e-23  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2218  extracellular solute-binding protein family 1  26.33 
 
 
479 aa  112  1.0000000000000001e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00910899  n/a   
 
 
-
 
NC_011899  Hore_00780  extracellular solute-binding protein family 1  27.81 
 
 
411 aa  112  1.0000000000000001e-23  Halothermothrix orenii H 168  Bacteria  normal  0.0480859  n/a   
 
 
-
 
NC_011368  Rleg2_5349  extracellular solute-binding protein family 1  26.23 
 
 
406 aa  111  2.0000000000000002e-23  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.535832 
 
 
-
 
NC_009953  Sare_2552  extracellular solute-binding protein  22.71 
 
 
443 aa  111  2.0000000000000002e-23  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.00000382941 
 
 
-
 
NC_012852  Rleg_6156  extracellular solute-binding protein family 1  27.85 
 
 
410 aa  112  2.0000000000000002e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.889741  hitchhiker  0.000305646 
 
 
-
 
NC_011371  Rleg2_6572  extracellular solute-binding protein family 1  27.82 
 
 
410 aa  111  2.0000000000000002e-23  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00103217  normal  0.480926 
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  28.06 
 
 
444 aa  111  3e-23  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
NC_009620  Smed_4557  extracellular solute-binding protein  28.53 
 
 
412 aa  111  3e-23  Sinorhizobium medicae WSM419  Bacteria  normal  0.302395  normal 
 
 
-
 
NC_009380  Strop_2403  extracellular solute-binding protein  23.26 
 
 
441 aa  110  4.0000000000000004e-23  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  27.48 
 
 
504 aa  110  5e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_0203  extracellular solute-binding protein family 1  26.75 
 
 
441 aa  109  1e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.346278  normal  0.123927 
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  25.43 
 
 
424 aa  107  4e-22  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_013131  Caci_4697  extracellular solute-binding protein family 1  28.63 
 
 
442 aa  107  4e-22  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00367387  normal 
 
 
-
 
NC_007413  Ava_3042  extracellular solute-binding protein  26.87 
 
 
406 aa  107  5e-22  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0658677  normal 
 
 
-
 
NC_012669  Bcav_1680  extracellular solute-binding protein family 1  26.88 
 
 
430 aa  107  5e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.173253  normal 
 
 
-
 
NC_012669  Bcav_3712  extracellular solute-binding protein family 1  27.13 
 
 
421 aa  107  5e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.411366 
 
 
-
 
NC_009523  RoseRS_1359  extracellular solute-binding protein  24.66 
 
 
458 aa  107  5e-22  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5398  ABC transporter substrate binding protein (sugar)  27.94 
 
 
403 aa  105  1e-21  Agrobacterium vitis S4  Bacteria  normal  0.14652  n/a   
 
 
-
 
NC_008025  Dgeo_0751  extracellular solute-binding protein  26.67 
 
 
411 aa  105  2e-21  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0314212  normal 
 
 
-
 
NC_009565  TBFG_12341  periplasmic sugar-binding lipoprotein uspC  23.48 
 
 
440 aa  105  2e-21  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3566  extracellular solute-binding protein  24.39 
 
 
454 aa  105  2e-21  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.42847  normal  0.297516 
 
 
-
 
NC_013205  Aaci_0913  extracellular solute-binding protein family 1  27.38 
 
 
421 aa  105  2e-21  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2474  extracellular solute-binding protein family 1  25.98 
 
 
484 aa  104  3e-21  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000108946  n/a   
 
 
-
 
NC_007333  Tfu_1702  sugar-binding protein  27.16 
 
 
442 aa  104  4e-21  Thermobifida fusca YX  Bacteria  normal  0.981171  n/a   
 
 
-
 
NC_009565  TBFG_12078  sugar-binding lipoprotein  24.84 
 
 
439 aa  104  4e-21  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29730  ABC-type sugar transport system, periplasmic component  27.16 
 
 
434 aa  104  4e-21  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3119  extracellular solute-binding protein family 1  27.09 
 
 
428 aa  104  4e-21  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014210  Ndas_0659  extracellular solute-binding protein family 1  26.95 
 
 
425 aa  104  4e-21  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.579585  normal  0.728331 
 
 
-
 
NC_010320  Teth514_0397  extracellular solute-binding protein  27.57 
 
 
428 aa  104  4e-21  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3393  extracellular solute-binding protein family 1  29.35 
 
 
412 aa  103  5e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.205631 
 
 
-
 
NC_013526  Tter_2451  extracellular solute-binding protein family 1  27.63 
 
 
449 aa  103  8e-21  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.135643  n/a   
 
 
-
 
NC_013093  Amir_2920  extracellular solute-binding protein family 1  28.99 
 
 
424 aa  103  8e-21  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008698  Tpen_1152  extracellular solute-binding protein  25.99 
 
 
393 aa  103  9e-21  Thermofilum pendens Hrk 5  Archaea  normal  0.0401617  n/a   
 
 
-
 
NC_011369  Rleg2_3121  extracellular solute-binding protein family 1  29.45 
 
 
412 aa  102  1e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1941  sugar ABC transporter, sugar-binding protein, putative  25.17 
 
 
434 aa  102  2e-20  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3983  extracellular solute-binding protein family 1  26.21 
 
 
456 aa  102  2e-20  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0897  extracellular solute-binding protein family 1  27.91 
 
 
446 aa  102  2e-20  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0316444  n/a   
 
 
-
 
NC_013411  GYMC61_2959  extracellular solute-binding protein family 1  25.71 
 
 
437 aa  101  3e-20  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_3128  extracellular solute-binding protein family 1  29.85 
 
 
450 aa  101  3e-20  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0477771 
 
 
-
 
NC_009664  Krad_2545  extracellular solute-binding protein family 1  31.01 
 
 
442 aa  100  6e-20  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4883  extracellular solute-binding protein family 1  27.9 
 
 
436 aa  99.8  9e-20  Conexibacter woesei DSM 14684  Bacteria  normal  0.504344  normal 
 
 
-
 
NC_013595  Sros_3538  Maltose-binding periplasmic protein/domains- like protein  24.48 
 
 
406 aa  99.4  1e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.385239  normal 
 
 
-
 
NC_012669  Bcav_0310  extracellular solute-binding protein family 1  26.12 
 
 
443 aa  99  1e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3394  ABC-type sugar transport systems permease component  25.23 
 
 
411 aa  99.4  1e-19  Meiothermus silvanus DSM 9946  Bacteria  normal  0.498756  normal  0.24931 
 
 
-
 
NC_008346  Swol_0405  ABC-type sugar transport system periplasmic component-like protein  25.72 
 
 
438 aa  98.2  2e-19  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2313  extracellular solute-binding protein  25.93 
 
 
901 aa  99  2e-19  Roseiflexus sp. RS-1  Bacteria  normal  0.708196  normal 
 
 
-
 
NC_013131  Caci_4320  extracellular solute-binding protein family 1  27.36 
 
 
425 aa  98.2  2e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.811375  hitchhiker  0.00841489 
 
 
-
 
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