| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2818 |
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| Symbol | |
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| ID | 5209787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3511311 |
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| End bp | 3512777 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640596417 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001277139 |
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| Protein GI | 148656934 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.179577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCC ATCACGAGGA AGAACTCGCG CATGAGTTGA AACAACGCGG TTTGAGTCGA
CGGGAAATCT TGCAGATCGG CGCGCGTCTT GGTTTGAGTG GCGCGGCAAT CGCAACAGTG
CTGGCAGCAT GCGGGCAGGC GCCGCAGCAA CCCGGAACGG GCGCTGCGCC GACCATTCCG
CCAGCAACTG AACCGACGCC AGCATCCCTC TATGATCCGG AGGAAGGCAA CAGCGGATGG
CCCACCAACG CCGTCTCCGA TCCGACAGAG CGTGTGGAGA TCAGCGTCGC TCATGCATGG
GACGCAGTCT TCTTCGAGCG CCAGAAGCAG TTCGATGCCC TTTTCATGCA GCGTCATCCG
AACATCGTCG TGAAAGCGGA AAATACGCCG TTTGGCGAGT ATCGACAGAA GTATGTCGCG
CAGGCTGCTG GCAACGCCCT GCCCGATATC ATGTACTGTC AGTTCTCCTG GGCGCAGGAG
TTCATCAAGA ATGGTCTGTT CCGCCCGCTC GACGACTACA TCGCCAGAGA GAAGGACTTC
AACCTCCAGG ACTTCACGCC GCAATCTCTC GTCTCCTACC AGCGCGACGG CAAACTGTGG
GGCATCCCAT ACGATGAGGG TCCTGCCAAT CTGTACTACA ACAAGGATAT CTTCGATGCC
GCTGGCATCC CGTATCCCGA TGAAACGTGG GACCTTGAGA AATTGAAGGA AGTTGCACTG
AAACTGACCC AGGGCGAAGG ACCGAACAAG ATTTTCGGTT TGGGTGAACT TCCAACCCTC
GGTGACTCGC TGGTTGCGCC GCCATACCTG ATGCCGTTCG GCGCCCAATA CCTGCGCGAG
CCGAAGGAGG ACGAGTGTCT GATCAATAAA CCGGAAGCGG TCGCAGCGCT CGAATGGTGG
CAGGAGTTGC GCGATAAGGG CGCCGTGCCC AGTCCGGCGG ATCTGCAGAA CGTCGCCTGG
CCCGCCTTCC AGTTCGGCAA GATCGCCATG ACCTTGCAGG GTTCGTGGGC GACCCCGCCG
ATCCGGGCCG GCGCAAAGTT CAACTGGGAC ATCGCCATGT GGCCCCGTGG TCCGAAGGCG
CATGTCACCT TCTCCGCCGG CAGCGCCTAC ATGATCACCC GCGACAGCAA GAACCCCGAC
GCGGCATGGA TCTACCTGAA CGAGTATCTC TCAACCGCCG GACAATCGTA TATGTGGGGG
ATTACCGGTC GCGGCAGCCC GGCGCGCCTC TCGGCGTGGC CCTCGTACCT CAACTCGAAG
TTCGCCCCTC CTGGCGCAAA ATATGTCGAA CAGGCGATGC GCACGATTGC CAGCCACGAC
ATCATCGATC AACCGACCGG TCCGCAGGTG ACGCAGGCGG CAGGACCGAT CTGGGACCTG
GTGGTGGCCG GTCAGTTGAG CGTGAAAGAA GCCTGTGACC AGGTGTTTGC CGCCGTTGAT
CCGATCATTG CCGTCAACCG GGCGTAA
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| Protein sequence | MATHHEEELA HELKQRGLSR REILQIGARL GLSGAAIATV LAACGQAPQQ PGTGAAPTIP
PATEPTPASL YDPEEGNSGW PTNAVSDPTE RVEISVAHAW DAVFFERQKQ FDALFMQRHP
NIVVKAENTP FGEYRQKYVA QAAGNALPDI MYCQFSWAQE FIKNGLFRPL DDYIAREKDF
NLQDFTPQSL VSYQRDGKLW GIPYDEGPAN LYYNKDIFDA AGIPYPDETW DLEKLKEVAL
KLTQGEGPNK IFGLGELPTL GDSLVAPPYL MPFGAQYLRE PKEDECLINK PEAVAALEWW
QELRDKGAVP SPADLQNVAW PAFQFGKIAM TLQGSWATPP IRAGAKFNWD IAMWPRGPKA
HVTFSAGSAY MITRDSKNPD AAWIYLNEYL STAGQSYMWG ITGRGSPARL SAWPSYLNSK
FAPPGAKYVE QAMRTIASHD IIDQPTGPQV TQAAGPIWDL VVAGQLSVKE ACDQVFAAVD
PIIAVNRA
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