Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4697 |
Symbol | |
ID | 8336051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5353428 |
End bp | 5354756 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644957797 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003115399 |
Protein GI | 256393835 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00367387 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCATCCAA GAACGGCACG AACCCTTCGC TCGGCCGCCG CGGCCGCCAC CACCGCCGTG CTGGCGCTGA CCGCCGCGTG CTCCTCCTCG GCGTCCTCGT CCTCGAAGGC GCCGGCGGAT CCGACGAAGC CGGTCACCAT CACCGTGTGG ACCGGACAGG ACGTGAACCC CGAGAAGCTG CTGGAGGGTC TGGCCAAGCA GTTCCACGCG GCGCACCCGA ACGTCACCGT CGACATCTCG CCCGGCGCGC CGACCACCGA CCAGCTGCTG CCGAAGCTGA TCGCCGCCTT CACCAGCGGC ACCTACCCGG ACATCTCCTA CAACTTCGGC AGCTGGGCCA CCCAGATGCA GCTGTCCGGC CGCACCCTGG ACATCACCGA CAAGGTCAAG GACCCGGCGG TGAAGTGGGA CGAGTTCCCG CCGGCGGCGC GGCAGACCGC GACGCCCAAC GGGCACGTGA TCGGCTTCCC GGCGGTCGTG GACAACCTGG CGCTGATGTA CAACAAGAAG CTGTTCCAGG CCGCGGGCCT GTCCGAGCCC ACGAACACCT GGACCTGGGA CGACTTCCGG GCGGCGGCGA AGAAGCTCAC CGACCCGGCG AAGAACGTCT ACGGCACCGC CTACTCCGTC TCCGGGACCG AGGACACCAC CTGGCACTTC TGGCCGCTGC TGTGGCAGAA GGGCGGCACC GTCCTGAACT CCGACAACAG CAAGGCCGCC TTCGACTCCG ACGCCGGTGT GGCAGCCCTG ACGTTCCTGC AGCAGATGGC TGTGACCGAC AAGTCCGTGT ACCTATCGCA GGACGACCAG AAGTACGCCG ACCTGTTCAA GTCCGGCCTG ATCGGCATGA TCATGAGCGG GCCGTGGCAG CTGTCGGACA ACGTCGGAGC GAACCTGGAC TACGGCGTCA CCTACCTGCC CTCCTTCGAC GGCACGAGCC ACCAGACGAT ATCCGGCCCG GACCTGTGGA CCCTGTACGA CCACCACGAT GCCAACCGGA CCTATTGGTC CTACCAGTTC GCGCAGTGGC TGACCTCGGC GCAGACCGAC CCGCAGTTCA ACCTCGCCAC CGGGAACCTG CCGCTGCGCA GCAGCGAGGC CGGCAGCCAG GAGTTCCAGG ACTACGCCAA GCAGTACCCC GGCGCGCAGA CACTCTTCGA CAACCTGAAG AACGCCACGA CCGCCCGGCC GACCGTCCCC GGCTACGTCG GCTTGTCCCA GGCTGTCGGA CAGGCGATCG CCAAGGTGCT GCAAGGTCAG GGGGATCCCA AGTCGGCCTT GCAAGACGCG GCGAAGGCGG CGGACGTCGC GCTGGCGCAA GCGGACTGA
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Protein sequence | MHPRTARTLR SAAAAATTAV LALTAACSSS ASSSSKAPAD PTKPVTITVW TGQDVNPEKL LEGLAKQFHA AHPNVTVDIS PGAPTTDQLL PKLIAAFTSG TYPDISYNFG SWATQMQLSG RTLDITDKVK DPAVKWDEFP PAARQTATPN GHVIGFPAVV DNLALMYNKK LFQAAGLSEP TNTWTWDDFR AAAKKLTDPA KNVYGTAYSV SGTEDTTWHF WPLLWQKGGT VLNSDNSKAA FDSDAGVAAL TFLQQMAVTD KSVYLSQDDQ KYADLFKSGL IGMIMSGPWQ LSDNVGANLD YGVTYLPSFD GTSHQTISGP DLWTLYDHHD ANRTYWSYQF AQWLTSAQTD PQFNLATGNL PLRSSEAGSQ EFQDYAKQYP GAQTLFDNLK NATTARPTVP GYVGLSQAVG QAIAKVLQGQ GDPKSALQDA AKAADVALAQ AD
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